RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 CYP39A1Q9NYL5 469 aa15.34■□□□□ 0.05
LSS-201ENST00000356396 HDAC6Q9UBN7 1215 aa15.34■□□□□ 0.05
LSS-201ENST00000356396 AJAP1Q9UKB5 411 aaPredicted RBP15.34■□□□□ 0.05
LSS-201ENST00000356396 MACROD2A1Z1Q3 448 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 MMP14P50281 582 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 HSD17B4P51659 736 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 MTERF2Q49AM1 385 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 PPP4R3BQ5MIZ7 849 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 CENPPQ6IPU0 288 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 WDR59Q6PJI9 974 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 CCDC60Q8IWA6 550 aaPredicted RBP15.33■□□□□ 0.05
LSS-201ENST00000356396 CCDC65Q8IXS2 484 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 CCDC150Q8NCX0 1101 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 LPAR1Q92633 364 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 SAAL1Q96ER3 474 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 AGO4Q9HCK5 861 aaKnown RBP15.33■□□□□ 0.05
LSS-201ENST00000356396 NMRK2Q9NPI5 230 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 PCDH10Q9P2E7 1040 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 LIMA1Q9UHB6 759 aaKnown RBP15.33■□□□□ 0.05
LSS-201ENST00000356396 ATAD5Q96QE3 1844 aa15.33■□□□□ 0.05
LSS-201ENST00000356396 ARHGEF35A5YM69 484 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 PIK3CDO00329 1044 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 SRGAP2O75044 1071 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 SSTR3P32745 418 aaPredicted RBP15.33■□□□□ 0.04
LSS-201ENST00000356396 DLG4P78352 724 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 DRP2Q13474 957 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 SUPT20HL1Q3ZLR7 823 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 PADI6Q6TGC4 694 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 SYT2Q8N9I0 419 aaPredicted RBP15.33■□□□□ 0.04
LSS-201ENST00000356396 ERMNQ8TAM6 284 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 TMEM143Q96AN5 459 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 NT5C3AQ9H0P0 336 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 ASCC2Q9H1I8 757 aaPredicted RBP15.33■□□□□ 0.04
LSS-201ENST00000356396 PSME4Q14997 1843 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 COL11A1P12107 1806 aaPredicted RBP15.33■□□□□ 0.04
LSS-201ENST00000356396 CIITAP33076 1130 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 POLR2FP61218 127 aaKnown RBP15.33■□□□□ 0.04
LSS-201ENST00000356396 FKBP15Q5T1M5 1219 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 FBXO16Q8IX29 292 aaPredicted RBP15.33■□□□□ 0.04
LSS-201ENST00000356396 SLC5A5Q92911 643 aa15.33■□□□□ 0.04
LSS-201ENST00000356396 LGALS16A8MUM7 142 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 REPS2Q8NFH8 660 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 MBOAT7Q96N66 472 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 CBWD1Q9BRT8 395 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 SMARCAL1Q9NZC9 954 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 PUF60Q9UHX1 559 aaKnown RBP15.32■□□□□ 0.04
LSS-201ENST00000356396 KCNMA1Q12791 1236 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 FAM178BQ8IXR5 827 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 ANKRD20A12PQ8NF67 263 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 ZNF507Q8TCN5 953 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 LENG1Q96BZ8 264 aaPredicted RBP15.32■□□□□ 0.04
LSS-201ENST00000356396 FAM20AQ96MK3 541 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 LACRTQ9GZZ8 138 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 VPS33BQ9H267 617 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 IMPACTQ9P2X3 320 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 KIF13BQ9NQT8 1826 aa15.32■□□□□ 0.04
LSS-201ENST00000356396 LRRC53A6NM62 1247 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 TMCO5BA8MYB1 307 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 K7ENM7 598 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 RAPGEF1Q13905 1077 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 ANO5Q75V66 913 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 ELOA2Q8IYF1 753 aaPredicted RBP15.31■□□□□ 0.04
LSS-201ENST00000356396 SYCP3Q8IZU3 236 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 CCDC127Q96BQ5 260 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 SEPT9Q9UHD8 586 aaPredicted RBP15.31■□□□□ 0.04
LSS-201ENST00000356396 LUC7L2Q9Y383 392 aaKnown RBP15.31■□□□□ 0.04
LSS-201ENST00000356396 ARIH2O95376 493 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 YWHABP31946 246 aaKnown RBP15.31■□□□□ 0.04
LSS-201ENST00000356396 EHHADHQ08426 723 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 C1orf186Q6ZWK4 172 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 BSNDQ8WZ55 320 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 DHTKD1Q96HY7 919 aaPredicted RBP15.31■□□□□ 0.04
LSS-201ENST00000356396 TEX13BQ9BXU2 312 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 KCTD10Q9H3F6 313 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 ZNF112Q9UJU3 913 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 REXO2Q9Y3B8 237 aaKnown RBP15.31■□□□□ 0.04
LSS-201ENST00000356396 MCM3APO60318 1980 aa15.31■□□□□ 0.04
LSS-201ENST00000356396 TGFB1I1O43294 461 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 RNASE9P60153 205 aaKnown RBP15.3■□□□□ 0.04
LSS-201ENST00000356396 IGBP1P78318 339 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 TDRD12Q587J7 1177 aaKnown RBP15.3■□□□□ 0.04
LSS-201ENST00000356396 ZNF569Q5MCW4 686 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 TRIM65Q6PJ69 517 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 ZNF710Q8N1W2 664 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 LSM14BQ9BX40 385 aaKnown RBP15.3■□□□□ 0.04
LSS-201ENST00000356396 MOV10L1Q9BXT6 1211 aaKnown RBP15.3■□□□□ 0.04
LSS-201ENST00000356396 LTBP3Q9NS15 1303 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 IBSPP21815 317 aaPredicted RBP15.3■□□□□ 0.04
LSS-201ENST00000356396 VWA3BQ502W6 1294 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 NYAP1Q6ZVC0 841 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 TOPORSQ9NS56 1045 aaPredicted RBP15.3■□□□□ 0.04
LSS-201ENST00000356396 KDM3AQ9Y4C1 1321 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 NT5C2P49902 561 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 USP14P54578 494 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 GFPT1Q06210 699 aaPredicted RBP15.3■□□□□ 0.04
LSS-201ENST00000356396 ERCC6LQ2NKX8 1250 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 NLRX1Q86UT6 975 aa15.3■□□□□ 0.04
LSS-201ENST00000356396 GUF1Q8N442 669 aaKnown RBP15.3■□□□□ 0.04
LSS-201ENST00000356396 FAM133AQ8N9E0 248 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms