RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GRB10Q13322 594 aa19■□□□□ 0.63
PDLIM7-201ENST00000355572 FBXO47Q5MNV8 452 aa19■□□□□ 0.63
PDLIM7-201ENST00000355572 SWSAP1Q6NVH7 229 aa19■□□□□ 0.63
PDLIM7-201ENST00000355572 TBCKQ8TEA7 893 aa19■□□□□ 0.63
PDLIM7-201ENST00000355572 GDPD5Q8WTR4 605 aa19■□□□□ 0.63
PDLIM7-201ENST00000355572 IFIH1Q9BYX4 1025 aaKnown RBP19■□□□□ 0.63
PDLIM7-201ENST00000355572 AZI2Q9H6S1 392 aa19■□□□□ 0.63
PDLIM7-201ENST00000355572 CDHR5Q9HBB8 845 aa19■□□□□ 0.63
PDLIM7-201ENST00000355572 PCDHA4Q9UN74 947 aa19■□□□□ 0.63
PDLIM7-201ENST00000355572 SPTBN5Q9NRC6 3674 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 POTEB3A0JP26 581 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 PFKFB2O60825 505 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 MRPS6P82932 125 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 UGCGQ16739 394 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 ME3Q16798 604 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 TAF2Q6P1X5 1199 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 POTEBQ6S5H4 581 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 MTHFD1LQ6UB35 978 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 TRMT1LQ7Z2T5 733 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 RTN4RL1Q86UN2 441 aaPredicted RBP18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 BLIDQ8IZY5 108 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 MICALL1Q8N3F8 863 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 NECAB1Q8N987 351 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 OXER1Q8TDS5 423 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 SEPT8Q92599 483 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 RAD9AQ99638 391 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 C17orf80Q9BSJ5 609 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 ZBED2Q9BTP6 218 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 ZNF302Q9NR11 478 aa18.99■□□□□ 0.63
PDLIM7-201ENST00000355572 FAM205CA6NFA0 338 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 KIF28PB7ZC32 967 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 BACH1O14867 736 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 ZNF862O60290 1169 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 UPP2O95045 317 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 FDPSP14324 419 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 CD52P31358 61 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 EARS2Q5JPH6 523 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 TRIM22Q8IYM9 498 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 DAGLBQ8NCG7 672 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 SP7Q8TDD2 431 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 ATP8B4Q8TF62 1192 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 TOP1MTQ969P6 601 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 SUGCTQ9HAC7 445 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 PCDHA2Q9Y5H9 948 aa18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 FNDC1Q4ZHG4 1894 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-201ENST00000355572 RRN3P2A6NIE6 340 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 CPLX1O14810 134 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 EFCAB14O75071 495 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 LINC00271P0C7V0 271 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 KLRC1P26715 233 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 SETQ01105 290 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 ZNF746Q6NUN9 644 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 PDXDC2PQ6P474 469 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 BICD2Q8TD16 824 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 TMEM40Q8WWA1 233 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 SLC5A5Q92911 643 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 PPP1R16BQ96T49 567 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 PHF20Q9BVI0 1012 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 UNC45AQ9H3U1 944 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 MAFBQ9Y5Q3 323 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 ARID2Q68CP9 1835 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 IGSF9BQ9UPX0 1349 aa18.97■□□□□ 0.63
PDLIM7-201ENST00000355572 VCANP13611 3396 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 SLC37A4O43826 429 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 AMHP03971 560 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 POU3F3P20264 500 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 ANAPC15P60006 121 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 ERVK-21P61565 698 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 INF2Q27J81 1249 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 MIS18BP1Q6P0N0 1132 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 MBOAT7Q96N66 472 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 SLKQ9H2G2 1235 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 GABBR1Q9UBS5 961 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 TRPV2Q9Y5S1 764 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 STK36Q9NRP7 1315 aa18.96■□□□□ 0.63
PDLIM7-201ENST00000355572 SMIM35A0A1B0GVV1 85 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 TMEM150BA6NC51 233 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 ENPP3O14638 875 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 CHMP2AO43633 222 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 HBP1O60381 514 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 PSMD10O75832 226 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 C22orf31O95567 290 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 TMEM266Q2M3C6 531 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 MCTP2Q6DN12 878 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 B3GNT9Q6UX72 402 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 KIAA0319LQ8IZA0 1049 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 TMX1Q9H3N1 280 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 RC3H2Q9HBD1 1191 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 TBC1D22BQ9NU19 505 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 A0A0C4DFX4 3053 aa18.95■□□□□ 0.62
PDLIM7-201ENST00000355572 PLXNA4Q9HCM2 1894 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 JAK2O60674 1132 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 USP11P51784 963 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 TFF2Q03403 129 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 FAM160B1Q5W0V3 765 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 TSHZ1Q6ZSZ6 1077 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 CRIPAKQ8N1N5 446 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 ETNPPLQ8TBG4 499 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 APBB2Q92870 758 aa18.94■□□□□ 0.62
PDLIM7-201ENST00000355572 TGS1Q96RS0 853 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms