RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 CRAMP1Q96RY5 1269 aa19.82■□□□□ 0.76
PDZD3-202ENST00000355547 FBXL5Q9UKA1 691 aa19.82■□□□□ 0.76
PDZD3-202ENST00000355547 POTEFA5A3E0 1075 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 PDXKO00764 312 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 PLSCR1O15162 318 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 ZEB2O60315 1214 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 AFPP02771 609 aaKnown RBP19.81■□□□□ 0.76
PDZD3-202ENST00000355547 POTEIP0CG38 1075 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 PON1P27169 355 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 IFI16Q16666 785 aaKnown RBP19.81■□□□□ 0.76
PDZD3-202ENST00000355547 POTEGQ6S5H5 508 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 POTEEQ6S8J3 1075 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 DEFB132Q7Z7B7 95 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 SYT2Q8N9I0 419 aaPredicted RBP19.81■□□□□ 0.76
PDZD3-202ENST00000355547 ISCUQ9H1K1 167 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 TAF1DQ9H5J8 278 aaPredicted RBP19.81■□□□□ 0.76
PDZD3-202ENST00000355547 USP40Q9NVE5 1235 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 NAGPAQ9UK23 515 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 PCDHA1Q9Y5I3 950 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 TBX3O15119 743 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 SERPINB2P05120 415 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 GUCY2FP51841 1108 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 TRADDQ15628 312 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 ENOX2Q16206 610 aaKnown RBP19.81■□□□□ 0.76
PDZD3-202ENST00000355547 CERS5Q8N5B7 392 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 UIMC1Q96RL1 719 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 MXD3Q9BW11 206 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 COA1Q9GZY4 146 aa19.81■□□□□ 0.76
PDZD3-202ENST00000355547 KCNK3O14649 394 aa19.8■□□□□ 0.76
PDZD3-202ENST00000355547 SPATA31C1P0DKV0 1188 aa19.8■□□□□ 0.76
PDZD3-202ENST00000355547 RPA1P27694 616 aa19.8■□□□□ 0.76
PDZD3-202ENST00000355547 AP3B2Q13367 1082 aa19.8■□□□□ 0.76
PDZD3-202ENST00000355547 PDCLQ13371 301 aa19.8■□□□□ 0.76
PDZD3-202ENST00000355547 EXOC3L4Q17RC7 722 aa19.8■□□□□ 0.76
PDZD3-202ENST00000355547 KCTD16Q68DU8 428 aa19.8■□□□□ 0.76
PDZD3-202ENST00000355547 TTC19Q6DKK2 380 aaPredicted RBP19.8■□□□□ 0.76
PDZD3-202ENST00000355547 CALR3Q96L12 384 aaKnown RBP19.8■□□□□ 0.76
PDZD3-202ENST00000355547 CCDC17Q96LX7 622 aa19.8■□□□□ 0.76
PDZD3-202ENST00000355547 LTBP1Q14766 1721 aa19.8■□□□□ 0.76
PDZD3-202ENST00000355547 MEIS2O14770 477 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 GUCY2CP25092 1073 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 RNASE9P60153 205 aaKnown RBP19.79■□□□□ 0.76
PDZD3-202ENST00000355547 PSMC6P62333 389 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 EPHA7Q15375 998 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 BMT2Q1RMZ1 405 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 MKL1Q969V6 931 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 SPAG5Q96R06 1193 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 GYS1P13807 737 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 CUL1Q13616 776 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 Q4G0T1 1027 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 ALKBH5Q6P6C2 394 aaKnown RBP19.79■□□□□ 0.76
PDZD3-202ENST00000355547 SLFN11Q7Z7L1 901 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 SFR1Q86XK3 245 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 ERMNQ8TAM6 284 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 RBM46Q8TBY0 533 aaKnown RBP19.79■□□□□ 0.76
PDZD3-202ENST00000355547 ATP6V1G3Q96LB4 118 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 RNPC3Q96LT9 517 aaKnown RBP19.79■□□□□ 0.76
PDZD3-202ENST00000355547 ZHX3Q9H4I2 956 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 DNM3Q9UQ16 869 aa19.79■□□□□ 0.76
PDZD3-202ENST00000355547 ATXN2Q99700 1313 aaKnown RBP19.79■□□□□ 0.76
PDZD3-202ENST00000355547 KLRG2A4D1S0 409 aaPredicted RBP19.78■□□□□ 0.76
PDZD3-202ENST00000355547 CALUO43852 315 aaPredicted RBP19.78■□□□□ 0.76
PDZD3-202ENST00000355547 ECHS1P30084 290 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 JAM2P57087 298 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 ERVK-9P63128 1117 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 ARHGAP4P98171 946 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 MCTP2Q6DN12 878 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 LRIG3Q6UXM1 1119 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 KLHL7Q8IXQ5 586 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 TPCN2Q8NHX9 752 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 REEP2Q9BRK0 252 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 METTL14Q9HCE5 456 aaKnown RBP19.78■□□□□ 0.76
PDZD3-202ENST00000355547 SIX2Q9NPC8 291 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 STK24Q9Y6E0 443 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 QSER1Q2KHR3 1735 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 A0A0A6YYK5 440 aaPredicted RBP19.78■□□□□ 0.76
PDZD3-202ENST00000355547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.78■□□□□ 0.76
PDZD3-202ENST00000355547 HMGB1P1B2RPK0 211 aaPredicted RBP19.78■□□□□ 0.76
PDZD3-202ENST00000355547 MPHOSPH10O00566 681 aaKnown RBP19.78■□□□□ 0.76
PDZD3-202ENST00000355547 AKAP3O75969 853 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 HLA-DOAP06340 250 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 XRCC5P13010 732 aaKnown RBP19.78■□□□□ 0.76
PDZD3-202ENST00000355547 CDC42EP5Q6NZY7 148 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 B4GALNT4Q76KP1 1039 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 DCAF4Q8WV16 495 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 LENG9Q96B70 501 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 P2RX7Q99572 595 aaKnown RBP19.78■□□□□ 0.76
PDZD3-202ENST00000355547 INTUQ9ULD6 942 aa19.78■□□□□ 0.76
PDZD3-202ENST00000355547 F8W031 263 aaPredicted RBP19.77■□□□□ 0.76
PDZD3-202ENST00000355547 SLC16A3O15427 465 aaKnown RBP19.77■□□□□ 0.76
PDZD3-202ENST00000355547 FLOT1O75955 427 aa19.77■□□□□ 0.76
PDZD3-202ENST00000355547 NR1D1P20393 614 aa19.77■□□□□ 0.76
PDZD3-202ENST00000355547 LSP1P33241 339 aa19.77■□□□□ 0.76
PDZD3-202ENST00000355547 MMP14P50281 582 aa19.77■□□□□ 0.76
PDZD3-202ENST00000355547 ATP1A2P50993 1020 aa19.77■□□□□ 0.76
PDZD3-202ENST00000355547 PABPC4Q13310 644 aaKnown RBP eCLIP19.77■□□□□ 0.76
PDZD3-202ENST00000355547 SP8Q8IXZ3 490 aa19.77■□□□□ 0.76
PDZD3-202ENST00000355547 PAGR1Q9BTK6 254 aa19.77■□□□□ 0.76
PDZD3-202ENST00000355547 EPN3Q9H201 632 aa19.77■□□□□ 0.76
PDZD3-202ENST00000355547 RABEP2Q9H5N1 569 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms