RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PPP4R3CPQ6ZMV5 832 aa19.42■□□□□ 0.7
COL18A1-202ENST00000355480 TMTC3Q6ZXV5 915 aa19.42■□□□□ 0.7
COL18A1-202ENST00000355480 SOWAHDA6NJG2 315 aa19.42■□□□□ 0.7
COL18A1-202ENST00000355480 PMLP29590 882 aa19.42■□□□□ 0.7
COL18A1-202ENST00000355480 HSPH1Q92598 858 aa19.42■□□□□ 0.7
COL18A1-202ENST00000355480 ATP6V0A4Q9HBG4 840 aa19.42■□□□□ 0.7
COL18A1-202ENST00000355480 FBXO40Q9UH90 709 aa19.42■□□□□ 0.7
COL18A1-202ENST00000355480 INPP5FQ9Y2H2 1132 aa19.42■□□□□ 0.7
COL18A1-202ENST00000355480 GNAT1P11488 350 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 HOXA7P31268 230 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-202ENST00000355480 CIITAP33076 1130 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 PCDHA13Q9Y5I0 950 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 GNGT2O14610 69 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 FGD4Q96M96 766 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 MYO3BQ8WXR4 1341 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 ERVK-7P63135 1459 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 ECE2O60344 883 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 TBK1Q9UHD2 729 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 ZBTB5O15062 677 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 ZNF500O60304 480 aaPredicted RBP19.41■□□□□ 0.7
COL18A1-202ENST00000355480 TOM1L1O75674 476 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 DHX9Q08211 1270 aaKnown RBP19.41■□□□□ 0.7
COL18A1-202ENST00000355480 BBS9Q3SYG4 887 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 THEM5Q8N1Q8 247 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 DEPDC1BQ8WUY9 529 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 STAG1Q8WVM7 1258 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 FAM167AQ96KS9 214 aa19.41■□□□□ 0.7
COL18A1-202ENST00000355480 NGRNQ9NPE2 291 aaKnown RBP19.4■□□□□ 0.7
COL18A1-202ENST00000355480 PSMA2P25787 234 aa19.4■□□□□ 0.7
COL18A1-202ENST00000355480 SNRNP48Q6IEG0 339 aaKnown RBP19.4■□□□□ 0.7
COL18A1-202ENST00000355480 CCDC197Q8NCU1 140 aa19.4■□□□□ 0.7
COL18A1-202ENST00000355480 C1orf228Q6PIY5 440 aa19.4■□□□□ 0.7
COL18A1-202ENST00000355480 BANK1Q8NDB2 785 aa19.4■□□□□ 0.7
COL18A1-202ENST00000355480 PRR36Q9H6K5 1346 aa19.4■□□□□ 0.7
COL18A1-202ENST00000355480 PRDX5P30044 214 aa19.4■□□□□ 0.7
COL18A1-202ENST00000355480 SLCO1A2P46721 670 aa19.4■□□□□ 0.7
COL18A1-202ENST00000355480 KRT33BQ14525 404 aa19.4■□□□□ 0.7
COL18A1-202ENST00000355480 GIMAP8Q8ND71 665 aaPredicted RBP19.4■□□□□ 0.7
COL18A1-202ENST00000355480 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.4■□□□□ 0.7
COL18A1-202ENST00000355480 OLA1Q9NTK5 396 aaKnown RBP19.4■□□□□ 0.7
COL18A1-202ENST00000355480 FEM1BQ9UK73 627 aa19.4■□□□□ 0.7
COL18A1-202ENST00000355480 CLDN3O15551 220 aa19.39■□□□□ 0.7
COL18A1-202ENST00000355480 LARGE1O95461 756 aa19.39■□□□□ 0.7
COL18A1-202ENST00000355480 ZNF394Q53GI3 561 aa19.39■□□□□ 0.7
COL18A1-202ENST00000355480 CDC26Q8NHZ8 85 aa19.39■□□□□ 0.7
COL18A1-202ENST00000355480 PPWD1Q96BP3 646 aaKnown RBP19.39■□□□□ 0.7
COL18A1-202ENST00000355480 NT5C2P49902 561 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 SCYL3Q8IZE3 742 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 TOPORSQ9NS56 1045 aaPredicted RBP19.39■□□□□ 0.69
COL18A1-202ENST00000355480 SCINQ9Y6U3 715 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 GSTA4O15217 222 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 EVI5O60447 810 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 RESTQ13127 1097 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 EPS15L1Q9UBC2 864 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 RNF14Q9UBS8 474 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 GCC2Q8IWJ2 1684 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 F8W8V4 182 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 MAPK6Q16659 721 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 NARFQ9UHQ1 456 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 ADGBQ8N7X0 1667 aa19.39■□□□□ 0.69
COL18A1-202ENST00000355480 SLC27A3Q5K4L6 730 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 PRELPP51888 382 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 TWF2Q6IBS0 349 aaKnown RBP19.38■□□□□ 0.69
COL18A1-202ENST00000355480 BZW1Q7L1Q6 419 aaKnown RBP19.38■□□□□ 0.69
COL18A1-202ENST00000355480 ALKBH8Q96BT7 664 aaKnown RBP19.38■□□□□ 0.69
COL18A1-202ENST00000355480 MINPP1Q9UNW1 487 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 FAM196BA6NMK8 535 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 LIG3P49916 1009 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 CYP27A1Q02318 531 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 MCPH1Q8NEM0 835 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 EXOC1LA0A1B0GW35 172 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 STMN1P16949 149 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 NFKBIAP25963 317 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 CUL4AQ13619 759 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 SLMAPQ14BN4 828 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 NDUFAF2Q8N183 169 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 TMEM47Q9BQJ4 181 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 NDUFA10O95299 355 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 PHKA2P46019 1235 aa19.38■□□□□ 0.69
COL18A1-202ENST00000355480 PPP6R3Q5H9R7 873 aaPredicted RBP19.38■□□□□ 0.69
COL18A1-202ENST00000355480 HMGB1P1B2RPK0 211 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-202ENST00000355480 PPARGP37231 505 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-202ENST00000355480 DR1Q01658 176 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 TNFAIP2Q03169 654 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 BRINP3Q76B58 766 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 CD209Q9NNX6 404 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 ABCB11O95342 1321 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 SPECC1L-ADORA2AF8WAN1 911 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 TTI1O43156 1089 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 SEC31AO94979 1220 aaKnown RBP19.37■□□□□ 0.69
COL18A1-202ENST00000355480 RNF219Q5W0B1 726 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-202ENST00000355480 AP1M1Q9BXS5 423 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 KDM5CP41229 1560 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 DENND3A2RUS2 1198 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 CCT5P48643 541 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 RWDD2BP57060 319 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 HP1BP3Q5SSJ5 553 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-202ENST00000355480 ALKBH5Q6P6C2 394 aaKnown RBP19.37■□□□□ 0.69
COL18A1-202ENST00000355480 VSTM4Q8IW00 320 aa19.37■□□□□ 0.69
COL18A1-202ENST00000355480 TTC25Q96NG3 672 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms