RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 FAM86B2P0C5J1 330 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 BMPR1AP36894 532 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 CAMK1Q14012 370 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 RNF20Q5VTR2 975 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 PTCRAQ6ISU1 281 aaPredicted RBP18.11■□□□□ 0.49
PDGFA-201ENST00000354513 PLPPR4Q7Z2D5 763 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 CCDC60Q8IWA6 550 aaPredicted RBP18.11■□□□□ 0.49
PDGFA-201ENST00000354513 TEX2Q8IWB9 1127 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 KCNB2Q92953 911 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 TRPC6Q9Y210 931 aa18.11■□□□□ 0.49
PDGFA-201ENST00000354513 KDM3AQ9Y4C1 1321 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 POTEB3A0JP26 581 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 FAM86C2PA6NEL3 165 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 ZBTB42B2RXF5 422 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 PI4K2BG5E9Z4 385 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 hCG_1984214I3L0E3 225 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 DHX15O43143 795 aaKnown RBP18.1■□□□□ 0.49
PDGFA-201ENST00000354513 FOSP01100 380 aaPredicted RBP18.1■□□□□ 0.49
PDGFA-201ENST00000354513 ATP4AP20648 1035 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 STAT5BP51692 787 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 AP3B2Q13367 1082 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 CTC1Q2NKJ3 1217 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 POTEBQ6S5H4 581 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 ABHD15Q6UXT9 468 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 SYNE3Q6ZMZ3 975 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 ZNF713Q8N859 430 aaPredicted RBP18.1■□□□□ 0.49
PDGFA-201ENST00000354513 SDF4Q9BRK5 362 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 PADI3Q9ULW8 664 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 MRPL42Q9Y6G3 142 aaKnown RBP18.1■□□□□ 0.49
PDGFA-201ENST00000354513 SQORQ9Y6N5 450 aa18.1■□□□□ 0.49
PDGFA-201ENST00000354513 SMIM35A0A1B0GVV1 85 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 DDX39AO00148 427 aaKnown RBP18.09■□□□□ 0.49
PDGFA-201ENST00000354513 RB1P06400 928 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 DNAJB1P25685 340 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 ADD1P35611 737 aaKnown RBP18.09■□□□□ 0.49
PDGFA-201ENST00000354513 PLA2G5P39877 138 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 GATMP50440 423 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 RCAN1P53805 252 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 DLX2Q07687 328 aaPredicted RBP18.09■□□□□ 0.49
PDGFA-201ENST00000354513 HYAL1Q12794 435 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 PFKFB3Q16875 520 aaPredicted RBP18.09■□□□□ 0.49
PDGFA-201ENST00000354513 MTHFD1LQ6UB35 978 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 CENPQQ7L2Z9 268 aaPredicted RBP18.09■□□□□ 0.49
PDGFA-201ENST00000354513 NIPA1Q7RTP0 329 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 AZI2Q9H6S1 392 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 CDHR5Q9HBB8 845 aa18.09■□□□□ 0.49
PDGFA-201ENST00000354513 MGEA5O60502 916 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 CDC45O75419 566 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 MMP1P03956 469 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 GTF2F1P35269 517 aaKnown RBP eCLIP18.08■□□□□ 0.49
PDGFA-201ENST00000354513 APOBRQ0VD83 1088 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 BTG3Q14201 252 aaPredicted RBP18.08■□□□□ 0.49
PDGFA-201ENST00000354513 PKN1Q16512 942 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 IER5Q5VY09 327 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 JAKMIP3Q5VZ66 844 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 GJD3Q8N144 294 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 TMEM40Q8WWA1 233 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 UIMC1Q96RL1 719 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 C11orf84Q9BUA3 381 aaPredicted RBP18.08■□□□□ 0.49
PDGFA-201ENST00000354513 CELF4Q9BZC1 486 aaKnown RBP18.08■□□□□ 0.49
PDGFA-201ENST00000354513 LMAN2LQ9H0V9 348 aa18.08■□□□□ 0.49
PDGFA-201ENST00000354513 EDIL3O43854 480 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 GPR37L1O60883 481 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 TBX10O75333 385 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 RPLP2P05387 115 aaKnown RBP18.07■□□□□ 0.48
PDGFA-201ENST00000354513 CYP3A4P08684 503 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 TMEM266Q2M3C6 531 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 TMEM31Q5JXX7 168 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 PLA2G4DQ86XP0 818 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 CMTR2Q8IYT2 770 aaKnown RBP18.07■□□□□ 0.48
PDGFA-201ENST00000354513 ATP8B4Q8TF62 1192 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 ERVK-5Q9HDB9 667 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 CLDND1Q9NY35 253 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 RWDD3Q9Y3V2 267 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 COL1A2P08123 1366 aa18.07■□□□□ 0.48
PDGFA-201ENST00000354513 TRIOO75962 3097 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 ESYT2A0FGR8 921 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 LINC01565O15544 149 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 CSPG5O95196 566 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 SCG2P13521 617 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 KLRC1P26715 233 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 PAK2Q13177 524 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 FTHL17Q9BXU8 183 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 ZMYND12Q9H0C1 365 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 ALG13Q9NP73 1137 aaKnown RBP18.06■□□□□ 0.48
PDGFA-201ENST00000354513 PLAGL2Q9UPG8 496 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 NOC2LQ9Y3T9 749 aaKnown RBP18.06■□□□□ 0.48
PDGFA-201ENST00000354513 SNX14Q9Y5W7 946 aa18.06■□□□□ 0.48
PDGFA-201ENST00000354513 C19orf67A6NJJ6 358 aa18.05■□□□□ 0.48
PDGFA-201ENST00000354513 HBP1O60381 514 aa18.05■□□□□ 0.48
PDGFA-201ENST00000354513 ITGB1P05556 798 aa18.05■□□□□ 0.48
PDGFA-201ENST00000354513 SLC26A2P50443 739 aa18.05■□□□□ 0.48
PDGFA-201ENST00000354513 METAP2P50579 478 aaKnown RBP eCLIP18.05■□□□□ 0.48
PDGFA-201ENST00000354513 KRT76Q01546 638 aa18.05■□□□□ 0.48
PDGFA-201ENST00000354513 ZP2Q05996 745 aa18.05■□□□□ 0.48
PDGFA-201ENST00000354513 KRT32Q14532 448 aa18.05■□□□□ 0.48
PDGFA-201ENST00000354513 NTRK3Q16288 839 aa18.05■□□□□ 0.48
PDGFA-201ENST00000354513 PAN2Q504Q3 1202 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms