RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 SP8Q8IXZ3 490 aa13.27□□□□□ -0.29
DDX4-201ENST00000353507 PBKQ96KB5 322 aa13.27□□□□□ -0.29
DDX4-201ENST00000353507 MBOAT7Q96N66 472 aa13.27□□□□□ -0.29
DDX4-201ENST00000353507 USP21Q9UK80 565 aa13.27□□□□□ -0.29
DDX4-201ENST00000353507 VGLL3A8MV65 326 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 TMCO5BA8MYB1 307 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 PDXKO00764 312 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 SLURP2P0DP57 97 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 MYBP10242 640 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 RPL13P26373 211 aaKnown RBP13.26□□□□□ -0.29
DDX4-201ENST00000353507 RPA1P27694 616 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 PSMC6P62333 389 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 NFIAQ12857 509 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 IRF2BP2Q7Z5L9 587 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 SYT2Q8N9I0 419 aaPredicted RBP13.26□□□□□ -0.29
DDX4-201ENST00000353507 ETNPPLQ8TBG4 499 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 METTL14Q9HCE5 456 aaKnown RBP13.26□□□□□ -0.29
DDX4-201ENST00000353507 LRRC4BQ9NT99 713 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 NAGPAQ9UK23 515 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 STK24Q9Y6E0 443 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 GOLGA6L10A6NI86 522 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 ZNF233A6NK53 670 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 FAM196BA6NMK8 535 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 NDUFAB1O14561 156 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 MEIS2O14770 477 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 TBX3O15119 743 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 GCNT3O95395 438 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 PON1P27169 355 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 CYP4A11Q02928 519 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 PTPROQ16827 1216 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 DOK7Q18PE1 504 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 USH1GQ495M9 461 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 MCTP2Q6DN12 878 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 IQCKQ8N0W5 287 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 AMNQ9BXJ7 453 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 GOLPH3Q9H4A6 298 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 TYW1Q9NV66 732 aaKnown RBP13.26□□□□□ -0.29
DDX4-201ENST00000353507 GCNT4Q9P109 453 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 A0A087WUV0 522 aaPredicted RBP13.26□□□□□ -0.29
DDX4-201ENST00000353507 NR3C1P04150 777 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 SPIRE1Q08AE8 756 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 TADA2BQ86TJ2 420 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 TAF1DQ9H5J8 278 aaPredicted RBP13.26□□□□□ -0.29
DDX4-201ENST00000353507 FAM169AQ9Y6X4 670 aa13.26□□□□□ -0.29
DDX4-201ENST00000353507 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 PGRMC1O00264 195 aaKnown RBP13.25□□□□□ -0.29
DDX4-201ENST00000353507 SLC16A3O15427 465 aaKnown RBP13.25□□□□□ -0.29
DDX4-201ENST00000353507 ZEB2O60315 1214 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 AKAP3O75969 853 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
DDX4-201ENST00000353507 Q4G0T1 1027 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 HHIPL2Q6UWX4 724 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 KDM7AQ6ZMT4 941 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 EPM2AIP1Q7L775 607 aaPredicted RBP13.25□□□□□ -0.29
DDX4-201ENST00000353507 H2AFZP0C0S5 128 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 SPATA31C1P0DKV0 1188 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 NR1D1P20393 614 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 ANXA13P27216 316 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 SNAP25P60880 206 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 DDR1Q08345 913 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 TCP10Q12799 353 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 H2AFVQ71UI9 128 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 PEX26Q7Z412 305 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 FBXO11Q86XK2 927 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 CD302Q8IX05 232 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 MICALL1Q8N3F8 863 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 LMBR1Q8WVP7 490 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX4-201ENST00000353507 ISCUQ9H1K1 167 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 BHMT2Q9H2M3 363 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 NYAP2Q9P242 653 aa13.25□□□□□ -0.29
DDX4-201ENST00000353507 RSPH10B2B2RC85 870 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 TOM1O60784 492 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 FOSP01100 380 aaPredicted RBP13.24□□□□□ -0.29
DDX4-201ENST00000353507 RSPH10BP0C881 870 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 ZNF76P36508 570 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 PRKCIP41743 596 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 ICA1Q05084 483 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 CUL1Q13616 776 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 EPHA7Q15375 998 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 TRADDQ15628 312 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 CEP85LQ5SZL2 805 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 APOBEC3HQ6NTF7 200 aaKnown RBP13.24□□□□□ -0.29
DDX4-201ENST00000353507 DNAAF5Q86Y56 855 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
DDX4-201ENST00000353507 ACTRT1Q8TDG2 376 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 FAM20AQ96MK3 541 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 DNAJC18Q9H819 358 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 TMEM59LQ9UK28 342 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 PLAAQ9Y263 795 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 RABGAP1Q9Y3P9 1069 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 NOC2LQ9Y3T9 749 aaKnown RBP13.24□□□□□ -0.29
DDX4-201ENST00000353507 SAMM50Q9Y512 469 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 PCDHB13Q9Y5F0 798 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 ASTN1O14525 1302 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 CLIC2O15247 247 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 PPP1R12BO60237 982 aaPredicted RBP13.24□□□□□ -0.29
DDX4-201ENST00000353507 HOXD13P35453 343 aa13.24□□□□□ -0.29
DDX4-201ENST00000353507 HSPA9P38646 679 aaKnown RBP13.24□□□□□ -0.29
DDX4-201ENST00000353507 CRKP46108 304 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms