RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 GCOM2Q9BZD3 368 aaPredicted RBP16.67■□□□□ 0.26
PTPRO-202ENST00000348962 HMGCS2P54868 508 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 SGO2Q562F6 1265 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 RNF219Q5W0B1 726 aaPredicted RBP16.67■□□□□ 0.26
PTPRO-202ENST00000348962 TBC1D10CQ8IV04 446 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 LRRC8AQ8IWT6 810 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 XXYLT1Q8NBI6 393 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 GDAP1Q8TB36 358 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 NDST4Q9H3R1 872 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 WDR19Q8NEZ3 1342 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 LRRD1A4D1F6 860 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 GRM4Q14833 912 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 RAPH1Q70E73 1250 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 ENAHQ8N8S7 591 aaPredicted RBP16.67■□□□□ 0.26
PTPRO-202ENST00000348962 PAGE5Q96GU1 130 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 SPATA33Q96N06 139 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 MTRQ99707 1265 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 UNC13DQ70J99 1090 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 KLHL14Q9P2G3 628 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 STK36Q9NRP7 1315 aa16.67■□□□□ 0.26
PTPRO-202ENST00000348962 EFCAB8A8MWE9 144 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 PPARGP37231 505 aaPredicted RBP16.66■□□□□ 0.26
PTPRO-202ENST00000348962 COG2Q14746 738 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 IQCB1Q15051 598 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 MYLK4Q86YV6 388 aaPredicted RBP16.66■□□□□ 0.26
PTPRO-202ENST00000348962 TDRD7Q8NHU6 1098 aaKnown RBP16.66■□□□□ 0.26
PTPRO-202ENST00000348962 BAG5Q9UL15 447 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 SCINQ9Y6U3 715 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 SFI1A8K8P3 1242 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 BNIP3LO60238 219 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 CPP00450 1065 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 THOC5Q13769 683 aaKnown RBP16.66■□□□□ 0.26
PTPRO-202ENST00000348962 MAP3K21Q5TCX8 1036 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 PRR5LQ6MZQ0 368 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 DARS2Q6PI48 645 aaKnown RBP16.66■□□□□ 0.26
PTPRO-202ENST00000348962 RPAP3Q9H6T3 665 aaPredicted RBP16.66■□□□□ 0.26
PTPRO-202ENST00000348962 DAAM1Q9Y4D1 1078 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 TET3O43151 1660 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 SLC4A1P02730 911 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 NKX1-1Q15270 411 aaPredicted RBP16.66■□□□□ 0.26
PTPRO-202ENST00000348962 SF3B3Q15393 1217 aaKnown RBP16.66■□□□□ 0.26
PTPRO-202ENST00000348962 SWSAP1Q6NVH7 229 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 SCN4BQ8IWT1 228 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 BANK1Q8NDB2 785 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 MCUQ8NE86 351 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 CCHCR1Q8TD31 782 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 GABBR1Q9UBS5 961 aa16.66■□□□□ 0.26
PTPRO-202ENST00000348962 C19orf81C9J6K1 198 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 ZNF18P17022 549 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 KPNA2P52292 529 aaKnown RBP16.65■□□□□ 0.26
PTPRO-202ENST00000348962 PSMC5P62195 406 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 CPVLQ9H3G5 476 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 ELP3Q9H9T3 547 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 C1orf167Q5SNV9 1468 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
PTPRO-202ENST00000348962 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 FAM114A2Q9NRY5 505 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 IPO5O00410 1097 aaKnown RBP16.65■□□□□ 0.26
PTPRO-202ENST00000348962 ARHGAP25P42331 645 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 ASPHQ12797 758 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 TMEM35BQ8NCS4 154 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 NGRNQ9NPE2 291 aaKnown RBP16.65■□□□□ 0.26
PTPRO-202ENST00000348962 PTPN22Q9Y2R2 807 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 SPATA31A1Q5TZJ5 1347 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 SERPING1P05155 500 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 CCDC170Q8IYT3 715 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 LPAR1Q92633 364 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 SMYD2Q9NRG4 433 aa16.65■□□□□ 0.26
PTPRO-202ENST00000348962 NEDD4P46934 1319 aa16.64■□□□□ 0.26
PTPRO-202ENST00000348962 KRT3P12035 628 aa16.64■□□□□ 0.26
PTPRO-202ENST00000348962 RHPN2Q8IUC4 686 aa16.64■□□□□ 0.26
PTPRO-202ENST00000348962 SPDYE1Q8NFV5 336 aaPredicted RBP16.64■□□□□ 0.26
PTPRO-202ENST00000348962 CHD1O14646 1710 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 POTEMA6NI47 508 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 PGRMC1O00264 195 aaKnown RBP16.64■□□□□ 0.25
PTPRO-202ENST00000348962 ORC4O43929 436 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 ECEL1O95672 775 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 SPDYE6P0CI01 402 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 DYNLT1P63172 113 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 RESTQ13127 1097 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 TTC39CQ8N584 583 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 PPP2R3CQ969Q6 453 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 PIDD1Q9HB75 910 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 ZNF157P51786 506 aaPredicted RBP16.64■□□□□ 0.25
PTPRO-202ENST00000348962 GUCY2DQ02846 1103 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 UHMK1Q8TAS1 419 aaKnown RBP16.64■□□□□ 0.25
PTPRO-202ENST00000348962 TEX13BQ9BXU2 312 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 SEL1LQ9UBV2 794 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 ENTPD3O75355 529 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 PPARDQ03181 441 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 RBL2Q08999 1139 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 ZNF699Q32M78 642 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 LDHDQ86WU2 507 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 TTC25Q96NG3 672 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 RNF14Q9UBS8 474 aa16.64■□□□□ 0.25
PTPRO-202ENST00000348962 FAM8A1Q9UBU6 413 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms