RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 ATG7O95352 703 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 CHRNA1P02708 482 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 FAM86B2P0C5J1 330 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 INSRRP14616 1297 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 STAT5BP51692 787 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 MARCH8Q5T0T0 291 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
TUBD1-203ENST00000346141 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 TGS1Q96RS0 853 aaKnown RBP13.53□□□□□ -0.24
TUBD1-203ENST00000346141 SLC26A6Q9BXS9 759 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 IFIH1Q9BYX4 1025 aaKnown RBP13.53□□□□□ -0.24
TUBD1-203ENST00000346141 PRDM6Q9NQX0 595 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 MTCH2Q9Y6C9 303 aa13.53□□□□□ -0.24
TUBD1-203ENST00000346141 IGLV3-22A0A075B6J6 115 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 LINC01553A4QN01 128 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 RFXAPO00287 272 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 IPO5O00410 1097 aaKnown RBP13.52□□□□□ -0.25
TUBD1-203ENST00000346141 ERVK-21P61565 698 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 IGBP1P78318 339 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.25
TUBD1-203ENST00000346141 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.25
TUBD1-203ENST00000346141 TOB2Q14106 344 aaPredicted RBP13.52□□□□□ -0.25
TUBD1-203ENST00000346141 PLCB4Q15147 1175 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 FAM117BQ6P1L5 589 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 MICAL3Q7RTP6 2002 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 MICALL1Q8N3F8 863 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 NCOA5Q9HCD5 579 aaKnown RBP13.52□□□□□ -0.25
TUBD1-203ENST00000346141 TBC1D22BQ9NU19 505 aa13.52□□□□□ -0.25
TUBD1-203ENST00000346141 IGKV6D-21A0A0A0MT36 114 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 POTEB3A0JP26 581 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 CPLX1O14810 134 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 CCNE2O96020 404 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 MGAT3Q09327 533 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 GRB10Q13322 594 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 ABHD15Q6UXT9 468 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 DNAJB3Q8WWF6 145 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 TOP1MTQ969P6 601 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 ZNF274Q96GC6 653 aaPredicted RBP13.51□□□□□ -0.25
TUBD1-203ENST00000346141 ZNF577Q9BSK1 485 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 OSBPL7Q9BZF2 842 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 LMCD1Q9NZU5 365 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 TCEAL9Q9UHQ7 104 aa13.51□□□□□ -0.25
TUBD1-203ENST00000346141 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.5□□□□□ -0.25
TUBD1-203ENST00000346141 M0QZ92 97 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 DDX39AO00148 427 aaKnown RBP13.5□□□□□ -0.25
TUBD1-203ENST00000346141 BACH1O14867 736 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 DHX15O43143 795 aaKnown RBP13.5□□□□□ -0.25
TUBD1-203ENST00000346141 LPXNO60711 386 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 GHRP10912 638 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 CIITAP33076 1130 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 MRPS5P82675 430 aaKnown RBP13.5□□□□□ -0.25
TUBD1-203ENST00000346141 MRPS6P82932 125 aaKnown RBP13.5□□□□□ -0.25
TUBD1-203ENST00000346141 LPIN1Q14693 890 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 IER5Q5VY09 327 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 MIS18BP1Q6P0N0 1132 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 CPLX2Q6PUV4 134 aaKnown RBP13.5□□□□□ -0.25
TUBD1-203ENST00000346141 SPRED2Q7Z698 418 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 FAM177A1Q8N128 213 aaPredicted RBP13.5□□□□□ -0.25
TUBD1-203ENST00000346141 ASB2Q96Q27 587 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 UPF3BQ9BZI7 483 aaKnown RBP13.5□□□□□ -0.25
TUBD1-203ENST00000346141 FAM49AQ9H0Q0 323 aaPredicted RBP13.5□□□□□ -0.25
TUBD1-203ENST00000346141 VPS54Q9P1Q0 977 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 PCDHA2Q9Y5H9 948 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 BDP1A6H8Y1 2624 aa13.5□□□□□ -0.25
TUBD1-203ENST00000346141 SMIM35A0A1B0GVV1 85 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 ADAMTS3O15072 1205 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 HBP1O60381 514 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 PPFIA3O75145 1194 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 DEXIO95424 95 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 KRT76Q01546 638 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 SSRP1Q08945 709 aaKnown RBP13.49□□□□□ -0.25
TUBD1-203ENST00000346141 PRR16Q569H4 304 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 FBXO47Q5MNV8 452 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 ZNF746Q6NUN9 644 aaPredicted RBP13.49□□□□□ -0.25
TUBD1-203ENST00000346141 MAMSTRQ6ZN01 415 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 TSHZ1Q6ZSZ6 1077 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 CCDC60Q8IWA6 550 aaPredicted RBP13.49□□□□□ -0.25
TUBD1-203ENST00000346141 SMAP1Q8IYB5 467 aaPredicted RBP13.49□□□□□ -0.25
TUBD1-203ENST00000346141 RASGRP4Q8TDF6 673 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 ATP8B4Q8TF62 1192 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 SAMD11Q96NU1 681 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 C22orf23Q9BZE7 217 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 SCUBE2Q9NQ36 999 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 ZNF302Q9NR11 478 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 PDRG1Q9NUG6 133 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 MTUS1Q9ULD2 1270 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 CDY2AQ9Y6F7 541 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 SQORQ9Y6N5 450 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 COL1A2P08123 1366 aa13.49□□□□□ -0.25
TUBD1-203ENST00000346141 USP11P51784 963 aa13.48□□□□□ -0.25
TUBD1-203ENST00000346141 NLRP5P59047 1200 aa13.48□□□□□ -0.25
TUBD1-203ENST00000346141 SKIV2LQ15477 1246 aaKnown RBP13.48□□□□□ -0.25
TUBD1-203ENST00000346141 AAK1Q2M2I8 961 aa13.48□□□□□ -0.25
TUBD1-203ENST00000346141 PDXDC2PQ6P474 469 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms