RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PLPPR4Q7Z2D5 763 aa14.13□□□□□ -0.15
SGCA-202ENST00000344627 CLP1Q92989 425 aaKnown RBP14.13□□□□□ -0.15
SGCA-202ENST00000344627 LRFN3Q9BTN0 628 aa14.13□□□□□ -0.15
SGCA-202ENST00000344627 UPF3BQ9BZI7 483 aaKnown RBP14.13□□□□□ -0.15
SGCA-202ENST00000344627 AGO4Q9HCK5 861 aaKnown RBP14.13□□□□□ -0.15
SGCA-202ENST00000344627 NCOR1O75376 2440 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 REV3LO60673 3130 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 FSD2A1L4K1 749 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 PRPF3O43395 683 aaKnown RBP14.12□□□□□ -0.15
SGCA-202ENST00000344627 CHRNA1P02708 482 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 STAG3L1P0CL83 205 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 BMPR1AP36894 532 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 SREBF1P36956 1147 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 ACTR2P61160 394 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 MGAT3Q09327 533 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 PTCRAQ6ISU1 281 aaPredicted RBP14.12□□□□□ -0.15
SGCA-202ENST00000344627 SPRED2Q7Z698 418 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 PLA2G4DQ86XP0 818 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.12□□□□□ -0.15
SGCA-202ENST00000344627 DNAJB3Q8WWF6 145 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 P2RX5Q93086 422 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 OSBPL7Q9BZF2 842 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 FAM49AQ9H0Q0 323 aaPredicted RBP14.12□□□□□ -0.15
SGCA-202ENST00000344627 KCNH6Q9H252 994 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 TCEAL9Q9UHQ7 104 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 CYP46A1Q9Y6A2 500 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
SGCA-202ENST00000344627 BDP1A6H8Y1 2624 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 PRR33A8MZF0 331 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 MEIS1O00470 390 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 ENPP3O14638 875 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 BACH1O14867 736 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 GHRP10912 638 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 INSRRP14616 1297 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 GNA11P29992 359 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 CLK2P49760 499 aaKnown RBP14.11□□□□□ -0.15
SGCA-202ENST00000344627 STAT5BP51692 787 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 ITGB3BPQ13352 177 aaPredicted RBP14.11□□□□□ -0.15
SGCA-202ENST00000344627 FBXO47Q5MNV8 452 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 RUFY3Q7L099 469 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 REXO1Q8N1G1 1221 aaKnown RBP14.11□□□□□ -0.15
SGCA-202ENST00000344627 ZNF710Q8N1W2 664 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 POP1Q99575 1024 aaKnown RBP14.11□□□□□ -0.15
SGCA-202ENST00000344627 LARP6Q9BRS8 491 aaKnown RBP14.11□□□□□ -0.15
SGCA-202ENST00000344627 EPHX3Q9H6B9 360 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 NCOA5Q9HCD5 579 aaKnown RBP14.11□□□□□ -0.15
SGCA-202ENST00000344627 PCDHA2Q9Y5H9 948 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 KDM3AQ9Y4C1 1321 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 MYH9P35579 1960 aaKnown RBP14.11□□□□□ -0.15
SGCA-202ENST00000344627 SIP14410 1827 aa14.11□□□□□ -0.15
SGCA-202ENST00000344627 CPLX1O14810 134 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 PDIA3P30101 505 aaKnown RBP14.1□□□□□ -0.15
SGCA-202ENST00000344627 CTNNB1P35222 781 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 MRPS6P82932 125 aaKnown RBP14.1□□□□□ -0.15
SGCA-202ENST00000344627 SSRP1Q08945 709 aaKnown RBP14.1□□□□□ -0.15
SGCA-202ENST00000344627 LPIN1Q14693 890 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 PKN1Q16512 942 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 NIPA1Q7RTP0 329 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 TRIM22Q8IYM9 498 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 CMTR2Q8IYT2 770 aaKnown RBP14.1□□□□□ -0.15
SGCA-202ENST00000344627 BICD2Q8TD16 824 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 RASGRP4Q8TDF6 673 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 ZNF689Q96CS4 500 aaPredicted RBP14.1□□□□□ -0.15
SGCA-202ENST00000344627 ZBTB10Q96DT7 871 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 PCYT2Q99447 389 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 ZMYND12Q9H0C1 365 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 VPS54Q9P1Q0 977 aa14.1□□□□□ -0.15
SGCA-202ENST00000344627 COL4A4P53420 1690 aaPredicted RBP14.1□□□□□ -0.15
SGCA-202ENST00000344627 TCF20Q9UGU0 1960 aaKnown RBP14.09□□□□□ -0.15
SGCA-202ENST00000344627 EVPLQ92817 2033 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 SMIM35A0A1B0GVV1 85 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 ESYT2A0FGR8 921 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 POTEB3A0JP26 581 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 FAM86B1E9PN63 330 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 ADAMTS3O15072 1205 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 DGKIO75912 1065 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 MMP1P03956 469 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 FAM86B2P0C5J1 330 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 NLRP5P59047 1200 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 TMEM62Q0P6H9 643 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 STK3Q13188 491 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 BTG3Q14201 252 aaPredicted RBP14.09□□□□□ -0.15
SGCA-202ENST00000344627 PLCB4Q15147 1175 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 PRR16Q569H4 304 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 FAM160B1Q5W0V3 765 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 POTEBQ6S5H4 581 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 TRMT1LQ7Z2T5 733 aaKnown RBP14.09□□□□□ -0.15
SGCA-202ENST00000344627 NPAS4Q8IUM7 802 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 CKAP2LQ8IYA6 745 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 FBXL16Q8N461 479 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 CCDC148Q8NFR7 591 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 TRAPPC12Q8WVT3 735 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 ZNF577Q9BSK1 485 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 RNF26Q9BY78 433 aaPredicted RBP14.09□□□□□ -0.15
SGCA-202ENST00000344627 AGXT2Q9BYV1 514 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 RC3H2Q9HBD1 1191 aaKnown RBP14.09□□□□□ -0.15
SGCA-202ENST00000344627 ZSWIM6Q9HCJ5 1215 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 CDY2AQ9Y6F7 541 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 LOXHD1Q8IVV2 1947 aa14.09□□□□□ -0.15
SGCA-202ENST00000344627 IPO5O00410 1097 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms