RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 VIL1P09327 827 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 MICALCLQ6ZW33 695 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 URGCPQ8TCY9 931 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 SEPT1Q8WYJ6 367 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 GDAQ9Y2T3 454 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 UTP11Q9Y3A2 253 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 NWD1Q149M9 1564 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 OATP04181 439 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 CDC27P30260 824 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 DDIT3P35638 169 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 SCYL2Q6P3W7 929 aa17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 RTFDC1Q9BY42 306 aaPredicted RBP17.84■□□□□ 0.45
SMARCA4-201ENST00000344626 WTIPA6NIX2 430 aaPredicted RBP17.83■□□□□ 0.45
SMARCA4-201ENST00000344626 RNF8O76064 485 aa17.83■□□□□ 0.45
SMARCA4-201ENST00000344626 HERVK_113P62684 666 aa17.83■□□□□ 0.45
SMARCA4-201ENST00000344626 FAM205AQ6ZU69 1335 aa17.83■□□□□ 0.45
SMARCA4-201ENST00000344626 PDHBP11177 359 aa17.83■□□□□ 0.45
SMARCA4-201ENST00000344626 CCNE1P24864 410 aa17.83■□□□□ 0.45
SMARCA4-201ENST00000344626 DYDC2Q96IM9 177 aa17.83■□□□□ 0.45
SMARCA4-201ENST00000344626 SH2D3AQ9BRG2 576 aa17.83■□□□□ 0.45
SMARCA4-201ENST00000344626 RWDD2AQ9UIY3 292 aa17.83■□□□□ 0.45
SMARCA4-201ENST00000344626 CEP104O60308 925 aa17.83■□□□□ 0.44
SMARCA4-201ENST00000344626 RPS6P62753 249 aaKnown RBP17.83■□□□□ 0.44
SMARCA4-201ENST00000344626 LRRC63Q05C16 580 aa17.83■□□□□ 0.44
SMARCA4-201ENST00000344626 PAGE5Q96GU1 130 aa17.83■□□□□ 0.44
SMARCA4-201ENST00000344626 GCNAQ96QF7 691 aa17.83■□□□□ 0.44
SMARCA4-201ENST00000344626 EPB41L4AQ9HCS5 686 aaPredicted RBP17.83■□□□□ 0.44
SMARCA4-201ENST00000344626 INHBEP58166 350 aa17.83■□□□□ 0.44
SMARCA4-201ENST00000344626 GABPAQ06546 454 aa17.83■□□□□ 0.44
SMARCA4-201ENST00000344626 CLDN3O15551 220 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 VCAM1P19320 739 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 CDC42EP1Q00587 391 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 ARMCX2Q7L311 632 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 HAUS1Q96CS2 278 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 PHLPP1O60346 1717 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 TMEM62Q0P6H9 643 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 ANXA13P27216 316 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 EPSTI1Q96J88 318 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 MAP3K14Q99558 947 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 MROH8Q9H579 483 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 ABCB4P21439 1286 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 FGFR2P21802 821 aa17.82■□□□□ 0.44
SMARCA4-201ENST00000344626 GOLGA8IPA6NC78 632 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 GOLGA8JA6NMD2 632 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 ZNF568Q3ZCX4 644 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 UNC13DQ70J99 1090 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 TAF1DQ9H5J8 278 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 MED1Q15648 1581 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 H2AFZP0C0S5 128 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 SMARCA1P28370 1054 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 MXI1P50539 228 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 H2AFVQ71UI9 128 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 MAN1B1Q9UKM7 699 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 IKBKBO14920 756 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 TDP2O95551 362 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 VGLL4Q14135 290 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 CYP4F22Q6NT55 531 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 C8orf74Q6P047 294 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 SRBD1Q8N5C6 995 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 THAP9Q9H5L6 903 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 EPHA7Q15375 998 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 SLC12A6Q9UHW9 1150 aa17.81■□□□□ 0.44
SMARCA4-201ENST00000344626 THAP12O43422 761 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 PPP1R21Q6ZMI0 780 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 CCDC89Q8N998 374 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 SMARCAD1Q9H4L7 1026 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 CD2BP2O95400 341 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 EXOSC10Q01780 885 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 CFAP221Q4G0U5 840 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 RAD54LQ92698 747 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 NSRP1Q9H0G5 558 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 SEL1LQ9UBV2 794 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 ANAPC4Q9UJX5 808 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 ZC3H15Q8WU90 426 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 AK9Q5TCS8 1911 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 RESP18Q5W5W9 173 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 MAP7D3Q8IWC1 876 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 TRIM58Q8NG06 486 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 PDS5AQ29RF7 1337 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 SP3Q02447 781 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 THEM5Q8N1Q8 247 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 PAIP2Q9BPZ3 127 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 ASIC3Q9UHC3 531 aa17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 PIN4Q9Y237 131 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-201ENST00000344626 ADKP55263 362 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 PPATQ06203 517 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 XRRA1Q6P2D8 792 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 CPT1AP50416 773 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 IER5Q5VY09 327 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 INTS8Q75QN2 995 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 DAAM2Q86T65 1068 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 LXNQ9BS40 222 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 STARD7Q9NQZ5 370 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 ATP5DP30049 168 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 DGKDQ16760 1214 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
SMARCA4-201ENST00000344626 P2RX7Q99572 595 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms