RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 PALMO75781 387 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 TCP1P17987 556 aaKnown RBP23.52■■□□□ 1.36
CCDC38-201ENST00000344280 DNA2P51530 1060 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 SLC7A5Q01650 507 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 DCAF17Q5H9S7 520 aaPredicted RBP23.52■■□□□ 1.36
CCDC38-201ENST00000344280 OTOP1Q7RTM1 612 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 FRMD5Q7Z6J6 570 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 CNKSR1Q969H4 720 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 HSD17B14Q9BPX1 270 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 PDXKO00764 312 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 SLITRK3O94933 977 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 EYA4O95677 639 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 MCM3P25205 808 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 LMAN1P49257 510 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 ZYXQ15942 572 aaKnown RBP23.52■■□□□ 1.36
CCDC38-201ENST00000344280 IQCEQ6IPM2 695 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 SAMD1Q6SPF0 538 aaPredicted RBP23.52■■□□□ 1.36
CCDC38-201ENST00000344280 TPH2Q8IWU9 490 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 RNF10Q8N5U6 811 aaKnown RBP23.52■■□□□ 1.36
CCDC38-201ENST00000344280 EXOC4Q96A65 974 aa23.52■■□□□ 1.36
CCDC38-201ENST00000344280 SYF2O95926 243 aaKnown RBP23.51■■□□□ 1.35
CCDC38-201ENST00000344280 FTCDO95954 541 aa23.51■■□□□ 1.35
CCDC38-201ENST00000344280 NR3C1P04150 777 aa23.51■■□□□ 1.35
CCDC38-201ENST00000344280 UCHL3P15374 230 aa23.51■■□□□ 1.35
CCDC38-201ENST00000344280 PON1P27169 355 aa23.51■■□□□ 1.35
CCDC38-201ENST00000344280 NAB2Q15742 525 aa23.51■■□□□ 1.35
CCDC38-201ENST00000344280 ASIC2Q16515 512 aa23.51■■□□□ 1.35
CCDC38-201ENST00000344280 MAP9Q49MG5 647 aa23.51■■□□□ 1.35
CCDC38-201ENST00000344280 SELENOOQ9BVL4 669 aa23.51■■□□□ 1.35
CCDC38-201ENST00000344280 AJAP1Q9UKB5 411 aaPredicted RBP23.51■■□□□ 1.35
CCDC38-201ENST00000344280 SPDYE2BA6NHP3 402 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 AFPP02771 609 aaKnown RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 SPDYE6P0CI01 402 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 PTK2Q05397 1052 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 IRF2BP2Q7Z5L9 587 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 RBM46Q8TBY0 533 aaKnown RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 RIN2Q8WYP3 895 aaPredicted RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 DYDC2Q96IM9 177 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 PACSIN2Q9UNF0 486 aaPredicted RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 TMX2Q9Y320 296 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 TBCAO75347 108 aaKnown RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 XRCC5P13010 732 aaKnown RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 HNRNPH2P55795 449 aaKnown RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 ITIH3Q06033 890 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 BMT2Q1RMZ1 405 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 KIAA0753Q2KHM9 967 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 KSR1Q8IVT5 923 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 VIPAS39Q9H9C1 493 aa23.5■■□□□ 1.35
CCDC38-201ENST00000344280 RBM12Q9NTZ6 932 aaKnown RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 TYW1Q9NV66 732 aaKnown RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 WRAP73Q9P2S5 460 aaPredicted RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 HERC5Q9UII4 1024 aaKnown RBP23.5■■□□□ 1.35
CCDC38-201ENST00000344280 TGFB1I1O43294 461 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 CALUO43852 315 aaPredicted RBP23.49■■□□□ 1.35
CCDC38-201ENST00000344280 PSMD10O75832 226 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 RAD17O75943 681 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 NMT1P30419 496 aaKnown RBP23.49■■□□□ 1.35
CCDC38-201ENST00000344280 EXOC3L4Q17RC7 722 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 ZC2HC1CQ53FD0 456 aaPredicted RBP23.49■■□□□ 1.35
CCDC38-201ENST00000344280 CCDC181Q5TID7 509 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 LRCH2Q5VUJ6 765 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 TCERG1LQ5VWI1 586 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.49■■□□□ 1.35
CCDC38-201ENST00000344280 ZNF571Q7Z3V5 609 aaPredicted RBP23.49■■□□□ 1.35
CCDC38-201ENST00000344280 FAM71BQ8TC56 605 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 ARHGEF10LQ9HCE6 1279 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 CCDC66A2RUB6 948 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 HSP90B2PQ58FF3 399 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 SLC35C1Q96A29 364 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 ZBTB21Q9ULJ3 1066 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 PCDHB13Q9Y5F0 798 aa23.49■■□□□ 1.35
CCDC38-201ENST00000344280 ZMYM2Q9UBW7 1377 aa23.48■■□□□ 1.35
CCDC38-201ENST00000344280 EPHA7Q15375 998 aa23.48■■□□□ 1.35
CCDC38-201ENST00000344280 GJB7Q6PEY0 223 aa23.48■■□□□ 1.35
CCDC38-201ENST00000344280 GLIS2Q9BZE0 524 aaPredicted RBP23.48■■□□□ 1.35
CCDC38-201ENST00000344280 ZBTB12Q9Y330 459 aaPredicted RBP23.48■■□□□ 1.35
CCDC38-201ENST00000344280 AARSP49588 968 aaKnown RBP eCLIP23.48■■□□□ 1.35
CCDC38-201ENST00000344280 C1orf186Q6ZWK4 172 aa23.48■■□□□ 1.35
CCDC38-201ENST00000344280 TXLNBQ8N3L3 684 aa23.48■■□□□ 1.35
CCDC38-201ENST00000344280 AENQ8WTP8 325 aaKnown RBP23.48■■□□□ 1.35
CCDC38-201ENST00000344280 PLCB1Q9NQ66 1216 aa23.48■■□□□ 1.35
CCDC38-201ENST00000344280 FBXO28Q9NVF7 368 aa23.48■■□□□ 1.35
CCDC38-201ENST00000344280 ZNF70Q9UC06 446 aaPredicted RBP23.48■■□□□ 1.35
CCDC38-201ENST00000344280 COL2A1P02458 1487 aaPredicted RBP23.48■■□□□ 1.35
CCDC38-201ENST00000344280 CNTNAP1P78357 1384 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 GCOM1H8Y6P7 765 aaPredicted RBP23.47■■□□□ 1.35
CCDC38-201ENST00000344280 POLR2MP0CAP2 368 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 COG2Q14746 738 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 MIGA2Q7L4E1 593 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 SPAG5Q96R06 1193 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 SIX2Q9NPC8 291 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 OLFML3Q9NRN5 406 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 PSD3Q9NYI0 1048 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 STK24Q9Y6E0 443 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 MYCT1Q8N699 235 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 MED4Q9NPJ6 270 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 PCDHGC5Q9Y5F6 944 aa23.47■■□□□ 1.35
CCDC38-201ENST00000344280 AGPSO00116 658 aa23.46■■□□□ 1.35
CCDC38-201ENST00000344280 RNF40O75150 1001 aa23.46■■□□□ 1.35
CCDC38-201ENST00000344280 ARP10275 920 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms