RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PTTG2Q9NZH5 202 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 NOSIPQ9Y314 301 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 GMNCA6NCL1 334 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 WBP4O75554 376 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 TNNC2P02585 160 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 NUMA1Q14980 2115 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 C6orf10Q5SRN2 563 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 OR9Q1Q8NGQ5 310 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 FAM204AQ9H8W3 233 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PDZRN3Q9UPQ7 1066 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 F8W8V4 182 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 HSPA1AP0DMV8 641 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 HSPA1BP0DMV9 641 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 RXRBP28702 533 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TSTA3Q13630 321 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 KDM7AQ6ZMT4 941 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 SYTL5Q8TDW5 730 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 NSD2O96028 1365 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 SAC3D1A6NKF1 404 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 ATMINO43313 823 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TTC39AQ5SRH9 613 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CDCA2Q69YH5 1023 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 RBBP8NLQ8NC74 664 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 KIFC1Q9BW19 673 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 SPG7Q9UQ90 795 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 FAM83GA6ND36 823 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 RPN1P04843 607 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 RSBN1LQ6PCB5 846 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 COG4Q9H9E3 785 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CACYBPQ9HB71 228 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 GIPC1O14908 333 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TSGA10IPQ3SY00 556 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TMEM165Q9HC07 324 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 UVRAGQ9P2Y5 699 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 MTMR7Q9Y216 660 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 EFCAB10A6NFE3 127 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 RABL6Q3YEC7 729 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 RFT1Q96AA3 541 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 MYPNQ86TC9 1320 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 ADGRA3Q8IWK6 1321 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CES2O00748 559 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 MAP3K13O43283 966 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PAEPP09466 180 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 STRN3Q13033 797 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 MAPRE1Q15691 268 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF398Q8TD17 642 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 THAP11Q96EK4 314 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 C8orf37Q96NL8 207 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TSEN34Q9BSV6 310 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 EPC1Q9H2F5 836 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CLK4Q9HAZ1 481 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PRXQ9BXM0 1461 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 THAP12O43422 761 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 STAT1P42224 750 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 ZSWIM4Q9H7M6 989 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CHRAC1Q9NRG0 131 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 LYPLA2O95372 231 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PYGLP06737 847 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CDK17Q00537 523 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TBRG1Q3YBR2 411 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 MREGQ8N565 214 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 SPERTQ8NA61 448 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 SLC2A14Q8TDB8 520 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 LRRC8CQ8TDW0 803 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 MTBPQ96DY7 904 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 COG3Q96JB2 828 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CYP11B2P19099 503 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 KRT20P35900 424 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PPP2R5CQ13362 524 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 KCNB1Q14721 858 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 COG2Q14746 738 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 RGS21Q2M5E4 152 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF554Q86TJ5 538 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TMEM237Q96Q45 408 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PARD6BQ9BYG5 372 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 STX18Q9P2W9 335 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PCDHB12Q9Y5F1 795 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 WASHC2DQ5SRD0 308 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PLIN2Q99541 437 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF446Q9NWS9 450 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TMEM63CQ9P1W3 806 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 A0A087WZG4 1122 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PNMA8CA0A1B0GUJ8 204 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 A0A1W2PRG6 482 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TESPA1A2RU30 521 aaPredicted RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 KRT16P08779 473 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CCDC157Q569K6 752 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 DEPDC1Q5TB30 811 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 LRRC31Q6UY01 552 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PPP4R3CPQ6ZMV5 832 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 UQCC2Q9BRT2 126 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 FBXO28Q9NVF7 368 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 SENP1Q9P0U3 644 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 FCHSD2O94868 740 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 GSNP06396 782 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 P4HBP07237 508 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 UNC45BQ8IWX7 931 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PTPRN2Q92932 1015 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 L3MBTL2Q969R5 705 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms