RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 KNOP1Q1ED39 458 aaKnown RBP20.53■□□□□ 0.88
HOXA9-201ENST00000343483 CATSPERGQ6ZRH7 1159 aa20.53■□□□□ 0.88
HOXA9-201ENST00000343483 ZNF214Q9UL59 606 aaPredicted RBP20.53■□□□□ 0.88
HOXA9-201ENST00000343483 A0A0U1RQJ8 604 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 TESPA1A2RU30 521 aaPredicted RBP20.52■□□□□ 0.88
HOXA9-201ENST00000343483 PRPF6O94906 941 aaKnown RBP20.52■□□□□ 0.88
HOXA9-201ENST00000343483 GAP43P17677 238 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 OAZ1P54368 228 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 MAP3K9P80192 1104 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 ADAM9Q13443 819 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 PLS1Q14651 629 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 PPP4R3CPQ6ZMV5 832 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 EPM2AIP1Q7L775 607 aaPredicted RBP20.52■□□□□ 0.88
HOXA9-201ENST00000343483 SULF1Q8IWU6 871 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 MYCT1Q8N699 235 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 NEK9Q8TD19 979 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 ATRIPQ8WXE1 791 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 CHP1Q99653 195 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 IRX2Q9BZI1 471 aaPredicted RBP20.52■□□□□ 0.88
HOXA9-201ENST00000343483 ADAMTS5Q9UNA0 930 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 PCNTO95613 3336 aa20.52■□□□□ 0.88
HOXA9-201ENST00000343483 KIF5CO60282 957 aa20.52■□□□□ 0.87
HOXA9-201ENST00000343483 GNA14O95837 355 aa20.52■□□□□ 0.87
HOXA9-201ENST00000343483 EDRF1Q3B7T1 1238 aa20.52■□□□□ 0.87
HOXA9-201ENST00000343483 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.52■□□□□ 0.87
HOXA9-201ENST00000343483 ACRBPQ8NEB7 543 aa20.52■□□□□ 0.87
HOXA9-201ENST00000343483 UBXN4Q92575 508 aa20.52■□□□□ 0.87
HOXA9-201ENST00000343483 FAM207AQ9NSI2 230 aaPredicted RBP20.52■□□□□ 0.87
HOXA9-201ENST00000343483 SNCAIPQ9Y6H5 919 aa20.52■□□□□ 0.87
HOXA9-201ENST00000343483 ARHGEF35A5YM69 484 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 IQCA1LA6NCM1 817 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 NR2F2P24468 414 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 HOXD13P35453 343 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 ARHGAP29Q52LW3 1261 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 TEX13BQ9BXU2 312 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 MMRN2Q9H8L6 949 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 OLFML3Q9NRN5 406 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 SIK3Q9Y2K2 1263 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 MRFAP1Q9Y605 127 aa20.51■□□□□ 0.87
HOXA9-201ENST00000343483 RBBP6Q7Z6E9 1792 aaKnown RBP20.51■□□□□ 0.87
HOXA9-201ENST00000343483 CETN3O15182 167 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 TADA3O75528 432 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 ZBED6P86452 979 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 UBE2Q2Q8WVN8 375 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 PARVGQ9HBI0 331 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 TBC1D22BQ9NU19 505 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 ZNHIT6Q9NWK9 470 aaKnown RBP20.5■□□□□ 0.87
HOXA9-201ENST00000343483 PHIPQ8WWQ0 1821 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 EFCAB8A8MWE9 144 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 P4HBP07237 508 aaKnown RBP20.5■□□□□ 0.87
HOXA9-201ENST00000343483 FIGNQ5HY92 759 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 WDR59Q6PJI9 974 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 CCDC155Q8N6L0 562 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 ZSWIM4Q9H7M6 989 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 HOXC10Q9NYD6 342 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 TRAF3IP3Q9Y228 551 aa20.5■□□□□ 0.87
HOXA9-201ENST00000343483 PARP14Q460N5 1801 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 A0A1W2PQJ5 194 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 SPDYE16A6NNV3 312 aaPredicted RBP20.49■□□□□ 0.87
HOXA9-201ENST00000343483 RBM46Q8TBY0 533 aaKnown RBP20.49■□□□□ 0.87
HOXA9-201ENST00000343483 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 OGFRQ9NZT2 677 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 KCND2Q9NZV8 630 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 TCEAL9Q9UHQ7 104 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.49■□□□□ 0.87
HOXA9-201ENST00000343483 CSADQ9Y600 493 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 EPHB6O15197 1021 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 CALUO43852 315 aaPredicted RBP20.49■□□□□ 0.87
HOXA9-201ENST00000343483 PPP1R12BO60237 982 aaPredicted RBP20.49■□□□□ 0.87
HOXA9-201ENST00000343483 ATP9AO75110 1047 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 TOMM70O94826 608 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 CCND2P30279 289 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 NMT1P30419 496 aaKnown RBP20.49■□□□□ 0.87
HOXA9-201ENST00000343483 PPP2R3AQ06190 1150 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 KCNA1Q09470 495 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 BMT2Q1RMZ1 405 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 ZC3H3Q8IXZ2 948 aaKnown RBP20.49■□□□□ 0.87
HOXA9-201ENST00000343483 SMCR8Q8TEV9 937 aaPredicted RBP20.49■□□□□ 0.87
HOXA9-201ENST00000343483 IQCDQ96DY2 449 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 DDX41Q9UJV9 622 aaKnown RBP20.49■□□□□ 0.87
HOXA9-201ENST00000343483 CLEC11AQ9Y240 323 aa20.49■□□□□ 0.87
HOXA9-201ENST00000343483 PDXKO00764 312 aa20.48■□□□□ 0.87
HOXA9-201ENST00000343483 ATP2A1O14983 1001 aa20.48■□□□□ 0.87
HOXA9-201ENST00000343483 NDUFA10O95299 355 aa20.48■□□□□ 0.87
HOXA9-201ENST00000343483 NR3C2P08235 984 aa20.48■□□□□ 0.87
HOXA9-201ENST00000343483 H2AFXP16104 143 aaPredicted RBP20.48■□□□□ 0.87
HOXA9-201ENST00000343483 MEA1Q16626 185 aa20.48■□□□□ 0.87
HOXA9-201ENST00000343483 TRIM59Q8IWR1 403 aa20.48■□□□□ 0.87
HOXA9-201ENST00000343483 ACAD9Q9H845 621 aa20.48■□□□□ 0.87
HOXA9-201ENST00000343483 TYW1Q9NV66 732 aaKnown RBP20.48■□□□□ 0.87
HOXA9-201ENST00000343483 EPN1Q9Y6I3 576 aaPredicted RBP20.48■□□□□ 0.87
HOXA9-201ENST00000343483 QARSP47897 775 aaKnown RBP20.47■□□□□ 0.87
HOXA9-201ENST00000343483 MARSP56192 900 aaKnown RBP20.47■□□□□ 0.87
HOXA9-201ENST00000343483 SH3D19Q5HYK7 790 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 ZNF569Q5MCW4 686 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 MAP1SQ66K74 1059 aaPredicted RBP20.47■□□□□ 0.87
HOXA9-201ENST00000343483 VSIG10LQ86VR7 867 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 NSUN6Q8TEA1 469 aaKnown RBP20.47■□□□□ 0.87
HOXA9-201ENST00000343483 ODF2LQ9ULJ1 636 aa20.47■□□□□ 0.87
HOXA9-201ENST00000343483 POLR2AP24928 1970 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms