RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 C16orf59Q7L2K0 433 aa14.72□□□□□ -0.05
HLA-DQA1-201ENST00000343139 HSCBQ8IWL3 235 aa14.72□□□□□ -0.05
HLA-DQA1-201ENST00000343139 NRBP2Q9NSY0 501 aa14.72□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PCDHA2Q9Y5H9 948 aa14.72□□□□□ -0.05
HLA-DQA1-201ENST00000343139 SMIM35A0A1B0GVV1 85 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 LAD1O00515 517 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 ZNF862O60290 1169 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 CXCL10P02778 98 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 P4HBP07237 508 aaKnown RBP14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 EPHB4P54760 987 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 PSMC5P62195 406 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 FAM26DQ5JW98 314 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TMEM240Q5SV17 173 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 RASIP1Q5U651 963 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 FAM43BQ6ZT52 329 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 BRAPQ7Z569 592 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 RSPH3Q86UC2 560 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 NME8Q8N427 588 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 WNT8BQ93098 351 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 VWCEQ96DN2 955 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 TTC12Q9H892 705 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 DOCK5Q9H7D0 1870 aa14.71□□□□□ -0.05
HLA-DQA1-201ENST00000343139 ZBTB42B2RXF5 422 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 EML1O00423 815 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 OATP04181 439 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 MCM7P33993 719 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 QARSP47897 775 aaKnown RBP14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TOB1P50616 345 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 XKR3Q5GH77 459 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ZNF618Q5T7W0 954 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 MCTP1Q6DN14 999 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 CKAP2LQ8IYA6 745 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 NEK9Q8TD19 979 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 HERVK_113Q902F9 699 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 SCLYQ96I15 445 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 NIFKQ9BYG3 293 aaKnown RBP14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 PPME1Q9Y570 386 aa14.7□□□□□ -0.06
HLA-DQA1-201ENST00000343139 RSPH10B2B2RC85 870 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 MAGEB2O15479 319 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 RSPH10BP0C881 870 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 THPOP40225 353 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 PRKCEQ02156 737 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 SHHQ15465 462 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 UGCGQ16739 394 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 MTHFD1LQ6UB35 978 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 C4orf19Q8IY42 314 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ZNF710Q8N1W2 664 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 C4orf32Q8N8J7 132 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 HSD17B14Q9BPX1 270 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 MTIF3Q9H2K0 278 aaKnown RBP14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TMEM60Q9H2L4 133 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 PCDH10Q9P2E7 1040 aa14.69□□□□□ -0.06
HLA-DQA1-201ENST00000343139 STBD1O95210 358 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 LYPLA2O95372 231 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 FGBP02675 491 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 OR52Z1P0C646 297 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 PRPHP41219 470 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TXKP42681 527 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 GPNMBQ14956 572 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TARBP2Q15633 366 aaKnown RBP14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ZNF174Q15697 407 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 C9orf50Q5SZB4 431 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ZNF365Q70YC5 407 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 SQORQ9Y6N5 450 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 LAMA3Q16787 3333 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 BAIAP3O94812 1187 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 C22orf31O95567 290 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ACTN1P12814 892 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ATP2B1P20020 1258 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 SYT1P21579 422 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 KLRC1P26715 233 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 IGBP1P78318 339 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 PDIA5Q14554 519 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 GPR153Q6NV75 609 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 RUFY4Q6ZNE9 571 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 RNPC3Q96LT9 517 aaKnown RBP14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ZSWIM4Q9H7M6 989 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 PCDHB6Q9Y5E3 794 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 STK24Q9Y6E0 443 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 KDM3AQ9Y4C1 1321 aa14.68□□□□□ -0.06
HLA-DQA1-201ENST00000343139 NBNO60934 754 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 EFCAB14O75071 495 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 SLITRK3O94933 977 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 MUTP22033 750 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 MGAT3Q09327 533 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 MBTPS1Q14703 1052 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 IER5Q5VY09 327 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 NCAPH2Q6IBW4 605 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 EXOC8Q8IYI6 725 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 LINC01465Q8N7H1 131 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TRAPPC12Q8WVT3 735 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 DNAJB3Q8WWF6 145 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 CEP89Q96ST8 783 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 EIF2AK1Q9BQI3 630 aaKnown RBP14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 LXNQ9BS40 222 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TRIOBPQ9H2D6 2365 aa14.67□□□□□ -0.06
HLA-DQA1-201ENST00000343139 BMP15O95972 392 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms