RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 ZHX2Q9Y6X8 837 aa11.44□□□□□ -0.58
CAPRIN1-201ENST00000341394 MEIS1O00470 390 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 EDIL3O43854 480 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 UBXN2AP68543 259 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 UBE2SQ16763 222 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 WHAMMP3Q1A5X7 153 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 RBM43Q6ZSC3 357 aaKnown RBP11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 IFT20Q8IY31 132 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 AMNQ9BXJ7 453 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 ATP8A1Q9Y2Q0 1164 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 SASH3O75995 380 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 GUCY1A3Q02108 690 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 ZBTB16Q05516 673 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 NNTQ13423 1086 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 RPS6KA1Q15418 735 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 PEX26Q7Z412 305 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 CCDC155Q8N6L0 562 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 TMEM51Q9NW97 253 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 TMEM260Q9NX78 707 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 BICDL2A1A5D9 508 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 MFAP3LO75121 409 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 TNNC1P63316 161 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 PPFIA1Q13136 1202 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 CFAP221Q4G0U5 840 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 NYAP1Q6ZVC0 841 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 ADARB2Q9NS39 739 aaKnown RBP11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 USTQ9Y2C2 406 aa11.43□□□□□ -0.58
CAPRIN1-201ENST00000341394 CCDC160A6NGH7 325 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 SPDYE3A6NKU9 549 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 GRIN3BO60391 1043 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 FLOT1O75955 427 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 CFBP00751 764 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 KRT14P02533 472 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 EXOC4Q96A65 974 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 RIOX1Q9H6W3 641 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 NHEJ1Q9H9Q4 299 aaPredicted RBP11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 TBK1Q9UHD2 729 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 FAM169AQ9Y6X4 670 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 PDE4DIPQ5VU43 2346 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 TBC1D8O95759 1140 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 PRCPP42785 496 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 OR2W6PQ8NHA6 318 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 TBC1D5Q92609 795 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 MKL1Q969V6 931 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 AS3MTQ9HBK9 375 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 HOMER2Q9NSB8 354 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 AGPAT5Q9NUQ2 364 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 PCDHA6Q9UN73 950 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 PCDHA8Q9Y5H6 950 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 CSADQ9Y600 493 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 KRIT1O00522 736 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 CLIC2O15247 247 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 SPOPO43791 374 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 SEC24CP53992 1094 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 MXRA7P84157 204 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 FAM133AQ8N9E0 248 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 TBCKQ8TEA7 893 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 HAUS4Q9H6D7 363 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 VCPKMTQ9H867 229 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 SAMD15Q9P1V8 674 aa11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 DICER1Q9UPY3 1922 aaKnown RBP11.42□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L15C9J2P7 530 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L13C9JLJ4 530 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L11C9JVI0 530 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L18D6R9N7 530 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L22D6RA61 530 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L17D6RBQ6 530 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L19D6RCP7 530 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L20D6RJB6 530 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 PPP6R2O75170 966 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 LRRN2O75325 713 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 SMARCA1P28370 1054 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 CYP2J2P51589 502 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L24Q0WX57 530 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 USP17L6PQ6QN14 398 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 TC2NQ8N9U0 490 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 BANK1Q8NDB2 785 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 ENOX1Q8TC92 643 aaKnown RBP11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 P2RX7Q99572 595 aaKnown RBP11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 HPSEQ9Y251 543 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 MRFAP1Q9Y605 127 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 CTNND1O60716 968 aaKnown RBP11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 TRAF1Q13077 416 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 TRIP13Q15645 432 aaPredicted RBP11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 TEPSINQ96N21 525 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 FBXO28Q9NVF7 368 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 TMOD4Q9NZQ9 345 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 CTTNBP2NLQ9P2B4 639 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 TMX2Q9Y320 296 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 MTMR2Q13614 643 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 WDR78Q5VTH9 848 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 NEK8Q86SG6 692 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 ANKS4BQ8N8V4 417 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 TMEM60Q9H2L4 133 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 TBC1D12O60347 775 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 ABL1P00519 1130 aa11.41□□□□□ -0.58
CAPRIN1-201ENST00000341394 GFPT1Q06210 699 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms