RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ANO3Q9BYT9 981 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 TRIM4Q9C037 500 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 DUSP10Q9Y6W6 482 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 SGK1O00141 431 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 DKC1O60832 514 aaKnown RBP eCLIP16.03■□□□□ 0.16
RRP1B-201ENST00000340648 NR3C1P04150 777 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 ARL1P40616 181 aaPredicted RBP16.03■□□□□ 0.16
RRP1B-201ENST00000340648 CCDC93Q567U6 631 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 RHOT2Q8IXI1 618 aa16.03■□□□□ 0.16
RRP1B-201ENST00000340648 PDS5AQ29RF7 1337 aaKnown RBP16.03■□□□□ 0.16
RRP1B-201ENST00000340648 LIG4P49917 911 aa16.02■□□□□ 0.16
RRP1B-201ENST00000340648 TRIM28Q13263 835 aaKnown RBP16.02■□□□□ 0.16
RRP1B-201ENST00000340648 COL9A3Q14050 684 aaPredicted RBP16.02■□□□□ 0.16
RRP1B-201ENST00000340648 PPP2R5DQ14738 602 aa16.02■□□□□ 0.16
RRP1B-201ENST00000340648 PSMD6Q15008 389 aa16.02■□□□□ 0.16
RRP1B-201ENST00000340648 CHURC1Q8WUH1 139 aa16.02■□□□□ 0.16
RRP1B-201ENST00000340648 PODXLO00592 558 aa16.02■□□□□ 0.16
RRP1B-201ENST00000340648 EVI5O60447 810 aa16.02■□□□□ 0.16
RRP1B-201ENST00000340648 TTLL12Q14166 644 aaPredicted RBP16.02■□□□□ 0.16
RRP1B-201ENST00000340648 AGXT2Q9BYV1 514 aa16.02■□□□□ 0.16
RRP1B-201ENST00000340648 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.16
RRP1B-201ENST00000340648 PLEKP08567 350 aaPredicted RBP16.02■□□□□ 0.15
RRP1B-201ENST00000340648 SNAP25P60880 206 aa16.02■□□□□ 0.15
RRP1B-201ENST00000340648 FOXP4Q8IVH2 680 aaPredicted RBP16.02■□□□□ 0.15
RRP1B-201ENST00000340648 CCHCR1Q8TD31 782 aa16.02■□□□□ 0.15
RRP1B-201ENST00000340648 ZNF577Q9BSK1 485 aa16.02■□□□□ 0.15
RRP1B-201ENST00000340648 PITPNM3Q9BZ71 974 aa16.02■□□□□ 0.15
RRP1B-201ENST00000340648 MINPP1Q9UNW1 487 aa16.02■□□□□ 0.15
RRP1B-201ENST00000340648 H0Y3Z8 333 aa16.02■□□□□ 0.15
RRP1B-201ENST00000340648 SORBS3O60504 671 aa16.02■□□□□ 0.15
RRP1B-201ENST00000340648 YWHAGP61981 247 aaKnown RBP eCLIP16.02■□□□□ 0.15
RRP1B-201ENST00000340648 GIMAP8Q8ND71 665 aaPredicted RBP16.02■□□□□ 0.15
RRP1B-201ENST00000340648 PIGOQ8TEQ8 1089 aa16.02■□□□□ 0.15
RRP1B-201ENST00000340648 RNPC3Q96LT9 517 aaKnown RBP16.02■□□□□ 0.15
RRP1B-201ENST00000340648 EIF4E1BA6NMX2 242 aaKnown RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 MXI1P50539 228 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 TTBK2Q6IQ55 1244 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 NLRX1Q86UT6 975 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 MMGT1Q8N4V1 131 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 PDCD7Q8N8D1 485 aaKnown RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 GBP7Q8N8V2 638 aaPredicted RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 KCNV2Q8TDN2 545 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 MPHOSPH6Q99547 160 aaKnown RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 SYNGAP1Q96PV0 1343 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 CA4P22748 312 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 RWDD2BP57060 319 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 MRPL11Q9Y3B7 192 aaKnown RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 PHF20L1A8MW92 1017 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 ZNF18P17022 549 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 TMOD1P28289 359 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 HOXA13P31271 388 aaPredicted RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 HNRNPH1P31943 449 aaKnown RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 HOOK2Q96ED9 719 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■■■■■ 31.8
RRP1B-201ENST00000340648 GGT7Q9UJ14 662 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L15C9J2P7 530 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L13C9JLJ4 530 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L11C9JVI0 530 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L18D6R9N7 530 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L22D6RA61 530 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L17D6RBQ6 530 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L19D6RCP7 530 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L20D6RJB6 530 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 ORC4O43929 436 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.158e-7■■■□□ 17.1
RRP1B-201ENST00000340648 USP17L24Q0WX57 530 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 DMP1Q13316 513 aaPredicted RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 RBBP5Q15291 538 aaKnown RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 USP17L6PQ6QN14 398 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 GLYCTKQ8IVS8 523 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 TMEM60Q9H2L4 133 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 SLITRK6Q9H5Y7 841 aa16.01■□□□□ 0.15
RRP1B-201ENST00000340648 DIS3Q9Y2L1 958 aaKnown RBP16.01■□□□□ 0.15
RRP1B-201ENST00000340648 RAD51CO43502 376 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 ALAS1P13196 640 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 CDC37Q16543 378 aaPredicted RBP16■□□□□ 0.15
RRP1B-201ENST00000340648 SLC18A3Q16572 532 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 ZNF354CQ86Y25 554 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 TRIM6Q9C030 488 aaPredicted RBP16■□□□□ 0.15
RRP1B-201ENST00000340648 POTEFA5A3E0 1075 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 STAM2O75886 525 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 POTEIP0CG38 1075 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 LMNB2Q03252 620 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 SEMA3FQ13275 785 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 ABCB5Q2M3G0 1257 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 POTEGQ6S5H5 508 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 POTEEQ6S8J3 1075 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 SRRM1Q8IYB3 904 aaKnown RBP16■□□□□ 0.15
RRP1B-201ENST00000340648 CEP95Q96GE4 821 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 CFAP57Q96MR6 1250 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 PLA2G12BQ9BX93 195 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 EDEM3Q9BZQ6 932 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 HNRNPDLO14979 420 aaKnown RBP16■□□□□ 0.15
RRP1B-201ENST00000340648 TTI1O43156 1089 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 AOC3Q16853 763 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 DEPTORQ8TB45 409 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 VTI1AQ96AJ9 217 aa16■□□□□ 0.15
RRP1B-201ENST00000340648 ACCSQ96QU6 501 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms