RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 STK17AQ9UEE5 414 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 NRXN2Q9P2S2 1712 aa13.09□□□□□ -0.31
CCDC144CP-201ENST00000340196 KLRG2A4D1S0 409 aaPredicted RBP13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 SMIM23A6NLE4 172 aa13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 TTI1O43156 1089 aa13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 SART1O43290 800 aaKnown RBP13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 POLD1P28340 1107 aa13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 TNFRSF8P28908 595 aa13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 CASP4P49662 377 aa13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 ZNF844Q08AG5 666 aa13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 RPS6KA1Q15418 735 aa13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 RNF10Q8N5U6 811 aaKnown RBP13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 CHORDC1Q9UHD1 332 aaPredicted RBP13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 NOC2LQ9Y3T9 749 aaKnown RBP13.08□□□□□ -0.31
CCDC144CP-201ENST00000340196 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 RSPH10B2B2RC85 870 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 USP17L10C9JJH3 530 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 POLRMTO00411 1230 aaKnown RBP13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 CLIC2O15247 247 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 BAG3O95817 575 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 RSPH10BP0C881 870 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 NR2F2P24468 414 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 GRAPQ13588 217 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 DPP8Q6V1X1 898 aaPredicted RBP13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 C16orf86Q6ZW13 317 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 PRPF38AQ8NAV1 312 aaKnown RBP13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 NEDD1Q8NHV4 660 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 UHMK1Q8TAS1 419 aaKnown RBP13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 SGSM3Q96HU1 749 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 TAF1DQ9H5J8 278 aaPredicted RBP13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 OSGEPQ9NPF4 335 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 ROBO3Q96MS0 1386 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 PHF20L1A8MW92 1017 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 OPLAHO14841 1288 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 IRF6O14896 467 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 MED24O75448 989 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 KIF4AO95239 1232 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 KRT18P05783 430 aaKnown RBP13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 DDR1Q08345 913 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 NBPF9Q3BBW0 867 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 COBLL1Q53SF7 1204 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 ODF2Q5BJF6 829 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 AADACL2Q6P093 401 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 KSR1Q8IVT5 923 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 CCDC13Q8IYE1 715 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 MXD3Q9BW11 206 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 PCDHA12Q9UN75 941 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 NOVA2Q9UNW9 492 aaKnown RBP13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 PCDHA2Q9Y5H9 948 aa13.08□□□□□ -0.32
CCDC144CP-201ENST00000340196 H0YGN5 161 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 PLA2G4BP0C869 781 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 PABPC4Q13310 644 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 ARSHQ5FYA8 562 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 IRF2BP2Q7Z5L9 587 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 TAF4BQ92750 862 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 TMBIM4Q9HC24 238 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 NFS1Q9Y697 457 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 DDX60LQ5H9U9 1706 aaKnown RBP13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 MYBP10242 640 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 ABCB4P21439 1286 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 HOXA10P31260 410 aaPredicted RBP13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 CYP4A11Q02928 519 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 GLE1Q53GS7 698 aaKnown RBP13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 POTEAQ6S8J7 498 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 HDAC9Q9UKV0 1011 aa13.07□□□□□ -0.32
CCDC144CP-201ENST00000340196 DNM1LO00429 736 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 KRIT1O00522 736 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 FGFR1OPO95684 399 aaKnown RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 UCHL3P15374 230 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 CYP11B2P19099 503 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 HOXD13P35453 343 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 HSPA9P38646 679 aaKnown RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 ZNF211Q13398 564 aaPredicted RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 GRIPAP1Q4V328 841 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 NLGN1Q8N2Q7 840 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 P2RX7Q99572 595 aaKnown RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 OSBPL7Q9BZF2 842 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 RIOX1Q9H6W3 641 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 DDX20Q9UHI6 824 aaKnown RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 GCOM1H8Y6P7 765 aaPredicted RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 MYZAPP0CAP1 466 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 PPP1R2P41236 205 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 RHBDL3P58872 404 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 MAGOHP61326 146 aaKnown RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 TNNC1P63316 161 aa13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 ALKBH5Q6P6C2 394 aaKnown RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 FAM43BQ6ZT52 329 aaPredicted RBP13.06□□□□□ -0.32
CCDC144CP-201ENST00000340196 B4GALNT4Q76KP1 1039 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms