RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 LRMPQ12912 555 aa23.51■■□□□ 1.35
VRK2-201ENST00000340157 EPM2AIP1Q7L775 607 aaPredicted RBP23.51■■□□□ 1.35
VRK2-201ENST00000340157 CACTINQ8WUQ7 758 aaKnown RBP23.51■■□□□ 1.35
VRK2-201ENST00000340157 ARHGEF35A5YM69 484 aa23.5■■□□□ 1.35
VRK2-201ENST00000340157 SFI1A8K8P3 1242 aa23.5■■□□□ 1.35
VRK2-201ENST00000340157 UBA1P22314 1058 aaKnown RBP23.5■■□□□ 1.35
VRK2-201ENST00000340157 YWHABP31946 246 aaKnown RBP23.5■■□□□ 1.35
VRK2-201ENST00000340157 ACTR2P61160 394 aa23.5■■□□□ 1.35
VRK2-201ENST00000340157 MAPK7Q13164 816 aa23.5■■□□□ 1.35
VRK2-201ENST00000340157 SAPCD2Q86UD0 394 aa23.5■■□□□ 1.35
VRK2-201ENST00000340157 KCND2Q9NZV8 630 aa23.5■■□□□ 1.35
VRK2-201ENST00000340157 IMPACTQ9P2X3 320 aa23.5■■□□□ 1.35
VRK2-201ENST00000340157 TCEAL9Q9UHQ7 104 aa23.5■■□□□ 1.35
VRK2-201ENST00000340157 ZNF862O60290 1169 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 TBCAO75347 108 aaKnown RBP23.49■■□□□ 1.35
VRK2-201ENST00000340157 STBD1O95210 358 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 TPM3P06753 285 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 GUCY2CP25092 1073 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 ZNF131P52739 623 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 SP4Q02446 784 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 SPAG1Q07617 926 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 PADI6Q6TGC4 694 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 ABHD15Q6UXT9 468 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 CYFIP1Q7L576 1253 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 EEPD1Q7L9B9 569 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 DAW1Q8N136 415 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 SH2D3AQ9BRG2 576 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 KCTD10Q9H3F6 313 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 RTN4Q9NQC3 1192 aaKnown RBP23.49■■□□□ 1.35
VRK2-201ENST00000340157 TAB2Q9NYJ8 693 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 COL4A3BPQ9Y5P4 624 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 NKRFO15226 690 aaKnown RBP eCLIP23.49■■□□□ 1.35
VRK2-201ENST00000340157 HOXD13P35453 343 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 ZNF157P51786 506 aaPredicted RBP23.49■■□□□ 1.35
VRK2-201ENST00000340157 CCNA1P78396 465 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 CCDC60Q8IWA6 550 aaPredicted RBP23.49■■□□□ 1.35
VRK2-201ENST00000340157 MORC4Q8TE76 937 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 NOC3LQ8WTT2 800 aaKnown RBP23.49■■□□□ 1.35
VRK2-201ENST00000340157 FIZ1Q96SL8 496 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 PARK7Q99497 189 aaKnown RBP23.49■■□□□ 1.35
VRK2-201ENST00000340157 OLFML3Q9NRN5 406 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 GABBR1Q9UBS5 961 aa23.49■■□□□ 1.35
VRK2-201ENST00000340157 MYBP10242 640 aa23.48■■□□□ 1.35
VRK2-201ENST00000340157 PBX1P40424 430 aa23.48■■□□□ 1.35
VRK2-201ENST00000340157 COPB1P53618 953 aaKnown RBP23.48■■□□□ 1.35
VRK2-201ENST00000340157 LRRC63Q05C16 580 aa23.48■■□□□ 1.35
VRK2-201ENST00000340157 UTP14CQ5TAP6 766 aaKnown RBP23.48■■□□□ 1.35
VRK2-201ENST00000340157 FOXR2Q6PJQ5 311 aa23.48■■□□□ 1.35
VRK2-201ENST00000340157 LRRC55Q6ZSA7 311 aa23.48■■□□□ 1.35
VRK2-201ENST00000340157 ANO5Q75V66 913 aa23.48■■□□□ 1.35
VRK2-201ENST00000340157 NELFCDQ8IXH7 590 aa23.48■■□□□ 1.35
VRK2-201ENST00000340157 CTAGE1Q96RT6 745 aa23.48■■□□□ 1.35
VRK2-201ENST00000340157 IGF2BP3O00425 579 aaKnown RBP eCLIP23.47■■□□□ 1.35
VRK2-201ENST00000340157 BACH1O14867 736 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 ARIH2O95376 493 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 GAP43P17677 238 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 EEF1GP26641 437 aaKnown RBP23.47■■□□□ 1.35
VRK2-201ENST00000340157 PLA2G4FQ68DD2 849 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 ODF2LQ9ULJ1 636 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 SYNGAP1Q96PV0 1343 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 FARP2O94887 1054 aaPredicted RBP23.47■■□□□ 1.35
VRK2-201ENST00000340157 FAM13AO94988 1023 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 ATG7O95352 703 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 PSAPP07602 524 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 SWSAP1Q6NVH7 229 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 ARMCX5Q6P1M9 558 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 LRRC8AQ8IWT6 810 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 VPS16Q9H269 839 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 PARVGQ9HBI0 331 aa23.47■■□□□ 1.35
VRK2-201ENST00000340157 HIP1RO75146 1068 aa23.46■■□□□ 1.35
VRK2-201ENST00000340157 SUPT20HL2P0C7V6 817 aa23.46■■□□□ 1.35
VRK2-201ENST00000340157 NPEPPSP55786 919 aa23.46■■□□□ 1.35
VRK2-201ENST00000340157 TBX2Q13207 712 aaPredicted RBP23.46■■□□□ 1.35
VRK2-201ENST00000340157 ZNF792Q3KQV3 632 aa23.46■■□□□ 1.35
VRK2-201ENST00000340157 TRMT1LQ7Z2T5 733 aaKnown RBP23.46■■□□□ 1.35
VRK2-201ENST00000340157 CNOT6LQ96LI5 555 aaKnown RBP23.46■■□□□ 1.35
VRK2-201ENST00000340157 PYCARDQ9ULZ3 195 aa23.46■■□□□ 1.35
VRK2-201ENST00000340157 ADGRA2Q96PE1 1338 aa23.46■■□□□ 1.35
VRK2-201ENST00000340157 IGSF9BQ9UPX0 1349 aa23.46■■□□□ 1.35
VRK2-201ENST00000340157 ADORA2AP29274 412 aa23.45■■□□□ 1.35
VRK2-201ENST00000340157 BMT2Q1RMZ1 405 aa23.45■■□□□ 1.35
VRK2-201ENST00000340157 RGMBQ6NW40 437 aa23.45■■□□□ 1.35
VRK2-201ENST00000340157 CREBRFQ8IUR6 639 aa23.45■■□□□ 1.35
VRK2-201ENST00000340157 MYCT1Q8N699 235 aa23.45■■□□□ 1.35
VRK2-201ENST00000340157 MRPL44Q9H9J2 332 aaKnown RBP23.45■■□□□ 1.35
VRK2-201ENST00000340157 ANKEF1Q9NU02 776 aa23.45■■□□□ 1.35
VRK2-201ENST00000340157 DOCK3Q8IZD9 2030 aa23.45■■□□□ 1.34
VRK2-201ENST00000340157 B4DLN1 442 aa23.45■■□□□ 1.34
VRK2-201ENST00000340157 PRPF6O94906 941 aaKnown RBP23.45■■□□□ 1.34
VRK2-201ENST00000340157 TGFB3P10600 412 aa23.45■■□□□ 1.34
VRK2-201ENST00000340157 LY6KQ17RY6 165 aa23.45■■□□□ 1.34
VRK2-201ENST00000340157 FAM110CQ1W6H9 321 aa23.45■■□□□ 1.34
VRK2-201ENST00000340157 FBXO16Q8IX29 292 aaPredicted RBP23.45■■□□□ 1.34
VRK2-201ENST00000340157 ATP6V0A1Q93050 837 aa23.45■■□□□ 1.34
VRK2-201ENST00000340157 N4BP3O15049 544 aa23.44■■□□□ 1.34
VRK2-201ENST00000340157 USO1O60763 962 aaKnown RBP23.44■■□□□ 1.34
VRK2-201ENST00000340157 NMT1P30419 496 aaKnown RBP23.44■■□□□ 1.34
VRK2-201ENST00000340157 GSDMDP57764 484 aa23.44■■□□□ 1.34
VRK2-201ENST00000340157 KCNA1Q09470 495 aa23.44■■□□□ 1.34
VRK2-201ENST00000340157 SPECC1LQ69YQ0 1117 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms