RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 PNMA5Q96PV4 448 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 REEP2Q9BRK0 252 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 METTL14Q9HCE5 456 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 BLOC1S4Q9NUP1 217 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 FAM153AQ9UHL3 310 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 SLIT3O75094 1523 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 F5H6K3 240 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 BBOX1O75936 387 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 BCRP11274 1271 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 PSMC2P35998 433 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 MAGOHP61326 146 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 KLRC3Q07444 240 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 SLC18A3Q16572 532 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 MIER3Q7Z3K6 550 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 ZNF507Q8TCN5 953 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 TBC1D31Q96DN5 1066 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 ARHGEF10LQ9HCE6 1279 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 FBXL5Q9UKA1 691 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 NOC2LQ9Y3T9 749 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 TESPA1A2RU30 521 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 TTI1O43156 1089 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 BMP3P12645 472 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 UCHL3P15374 230 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 CETN2P41208 172 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 GCLMP48507 274 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 CASP4P49662 377 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 TSEN2Q8NCE0 465 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 TBK1Q9UHD2 729 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 FRMD3A2A2Y4 597 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 NF2P35240 595 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 PSMC6P62333 389 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 SF3B2Q13435 895 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 DYDC2Q96IM9 177 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 NAP1L3Q99457 506 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 JPH2Q9BR39 696 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 ZNF577Q9BSK1 485 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 TMEM51Q9NW97 253 aa12.05□□□□□ -0.48
SEMA4D-201ENST00000339861 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 CLTAP09496 248 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 DRAP1Q14919 205 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 MUM1L1Q5H9M0 696 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 THOC1Q96FV9 657 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 TACO1Q9BSH4 297 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 RAB17Q9H0T7 212 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 STK38LQ9Y2H1 464 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 RGPD5Q99666 1765 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 POLR2MP0CAP2 368 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 IRX3P78415 501 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 AMPD2Q01433 879 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 TRADDQ15628 312 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 CCDC38Q502W7 563 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 CREG2Q8IUH2 290 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 PROM2Q8N271 834 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 C4orf32Q8N8J7 132 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 RNPC3Q96LT9 517 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 FMO2Q99518 471 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 RTFDC1Q9BY42 306 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 GGT7Q9UJ14 662 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 ZNF263O14978 683 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 MED24O75448 989 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 FERP16591 822 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 MIIPQ5JXC2 388 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 SYDE2Q5VT97 1194 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 PLVAPQ9BX97 442 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 PARVGQ9HBI0 331 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 MRC1P22897 1456 aa12.04□□□□□ -0.48
SEMA4D-201ENST00000339861 LMO7Q8WWI1 1683 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 SSTR3P32745 418 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 CRKP46108 304 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 MTMR3Q13615 1198 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 GKAP1Q5VSY0 366 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 HOOK3Q86VS8 718 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 RNF10Q8N5U6 811 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 TLR10Q9BXR5 811 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 VIPAS39Q9H9C1 493 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 ATRNO75882 1429 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 PPIP5K2O43314 1243 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 ACSL3O95573 720 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 SYF2O95926 243 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 PRKG1Q13976 671 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 UAP1Q16222 522 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 XKR9Q5GH70 373 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 CYP2W1Q8TAV3 490 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 WHAMMQ8TF30 809 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 PSD3Q9NYI0 1048 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 BZW2Q9Y6E2 419 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 RAD17O75943 681 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 IFNB1P01574 187 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 ACTN3Q08043 901 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 PDIA5Q14554 519 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 FAM133BQ5BKY9 247 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 TCP11Q8WWU5 503 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 CASKIN2Q8WXE0 1202 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 ELMO3Q96BJ8 720 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 CCDC17Q96LX7 622 aa12.03□□□□□ -0.48
SEMA4D-201ENST00000339861 CEP63Q96MT8 703 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms