RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 ANKRD23Q86SG2 305 aa10.09□□□□□ -0.79
RPGR-202ENST00000339363 CCDC25Q86WR0 208 aa10.09□□□□□ -0.79
RPGR-202ENST00000339363 STAG2Q8N3U4 1231 aa10.09□□□□□ -0.79
RPGR-202ENST00000339363 C4orf32Q8N8J7 132 aa10.09□□□□□ -0.79
RPGR-202ENST00000339363 ZNF507Q8TCN5 953 aa10.09□□□□□ -0.79
RPGR-202ENST00000339363 CTNNBL1Q8WYA6 563 aaPredicted RBP10.09□□□□□ -0.79
RPGR-202ENST00000339363 CNKSR1Q969H4 720 aa10.09□□□□□ -0.79
RPGR-202ENST00000339363 GSDMAQ96QA5 445 aa10.09□□□□□ -0.79
RPGR-202ENST00000339363 CTTNBP2NLQ9P2B4 639 aa10.09□□□□□ -0.79
RPGR-202ENST00000339363 CNOT8Q9UFF9 292 aaKnown RBP10.09□□□□□ -0.79
RPGR-202ENST00000339363 LIMA1Q9UHB6 759 aaKnown RBP10.09□□□□□ -0.79
RPGR-202ENST00000339363 SEMA3EO15041 775 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 RAD51CO43502 376 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 ZCCHC18P0CG32 403 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 EIF4A3P38919 411 aaKnown RBP10.08□□□□□ -0.8
RPGR-202ENST00000339363 MAGEA10P43363 369 aaPredicted RBP10.08□□□□□ -0.8
RPGR-202ENST00000339363 DNM2P50570 870 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 PDE6CP51160 858 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 KCNQ4P56696 695 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 ZBED6P86452 979 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 ADAM9Q13443 819 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 SUSD4Q5VX71 490 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 GALNT17Q6IS24 598 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 LCA5Q86VQ0 697 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 CSGALNACT2Q8N6G5 542 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 GBP7Q8N8V2 638 aaPredicted RBP10.08□□□□□ -0.8
RPGR-202ENST00000339363 STMN2Q93045 179 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 HAUS1Q96CS2 278 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 YIPF2Q9BWQ6 316 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 CARD9Q9H257 536 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 PRDM16Q9HAZ2 1276 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 PAX3P23760 479 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 KIF11P52732 1056 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 NLRP5P59047 1200 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 DENND2CQ68D51 928 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 ANO7Q6IWH7 933 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 EXOC1Q9NV70 894 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 MAP3K15Q6ZN16 1313 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 DCDC2CA8MYV0 355 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 KLRC4O43908 158 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 SHBGP04278 402 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 SP100P23497 879 aaPredicted RBP10.08□□□□□ -0.8
RPGR-202ENST00000339363 ADCY1Q08828 1119 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 ZNF844Q08AG5 666 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 SFSWAPQ12872 951 aaKnown RBP10.08□□□□□ -0.8
RPGR-202ENST00000339363 ZNF268Q14587 947 aaPredicted RBP10.08□□□□□ -0.8
RPGR-202ENST00000339363 CFAP157Q5JU67 520 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 TTC38Q5R3I4 469 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 DAAM2Q86T65 1068 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 CCDC24Q8N4L8 307 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 LRRC8CQ8TDW0 803 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 DUSP9Q99956 384 aaKnown RBP10.08□□□□□ -0.8
RPGR-202ENST00000339363 PLA2G12BQ9BX93 195 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 RMND1Q9NWS8 449 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
RPGR-202ENST00000339363 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
RPGR-202ENST00000339363 SHANK3Q9BYB0 1731 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 A6NHS1 94 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 ZNF131P52739 623 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 CACNA2D1P54289 1103 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 GJA10Q969M2 543 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 KRT23Q9C075 422 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 FGFR1OP2Q9NVK5 253 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 AGAP1Q9UPQ3 857 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 UTP11Q9Y3A2 253 aaKnown RBP10.07□□□□□ -0.8
RPGR-202ENST00000339363 TNS2Q63HR2 1409 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 NVLO15381 856 aaKnown RBP10.07□□□□□ -0.8
RPGR-202ENST00000339363 TUBP50607 506 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 RPS6KA1Q15418 735 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 ALX1Q15699 326 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 OTUD6AQ7L8S5 288 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 GDAP1Q8TB36 358 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 TUBGCP2Q9BSJ2 902 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 FAM129AQ9BZQ8 928 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 TTYH3Q9C0H2 523 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 PLCB1Q9NQ66 1216 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 PCMTD2Q9NV79 361 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 CCDC87Q9NVE4 849 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 ADAM22Q9P0K1 906 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
RPGR-202ENST00000339363 SRRM3A6NNA2 597 aaPredicted RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 H7C1D1 291 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 KRIT1O00522 736 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 DAPK3O43293 454 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 HNRNPRO43390 633 aaKnown RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 RPN1P04843 607 aaKnown RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 ETS2P15036 469 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 NCALDP61601 193 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 ATP2C1P98194 919 aaPredicted RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 STK4Q13043 487 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 LRIG3Q6UXM1 1119 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 ADAT2Q7Z6V5 191 aaKnown RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 MAF1Q9H063 256 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 DDX47Q9H0S4 455 aaKnown RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 NLRC4Q9NPP4 1024 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 ATXN10Q9UBB4 475 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 USP15Q9Y4E8 981 aaPredicted RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 CNTNAP5Q8WYK1 1306 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 TMCC1O94876 653 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms