RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ADHFE1Q8IWW8 467 aa17.88■□□□□ 0.45
LINC01116-202ENST00000339037 FANCBQ8NB91 859 aa17.88■□□□□ 0.45
LINC01116-202ENST00000339037 TNPO1Q92973 898 aaKnown RBP17.88■□□□□ 0.45
LINC01116-202ENST00000339037 ZNF689Q96CS4 500 aaPredicted RBP17.88■□□□□ 0.45
LINC01116-202ENST00000339037 UIMC1Q96RL1 719 aa17.88■□□□□ 0.45
LINC01116-202ENST00000339037 PLVAPQ9BX97 442 aa17.88■□□□□ 0.45
LINC01116-202ENST00000339037 LSG1Q9H089 658 aaKnown RBP17.88■□□□□ 0.45
LINC01116-202ENST00000339037 AGO3Q9H9G7 860 aaKnown RBP17.88■□□□□ 0.45
LINC01116-202ENST00000339037 KCNH7Q9NS40 1196 aa17.88■□□□□ 0.45
LINC01116-202ENST00000339037 SLC9A2Q9UBY0 812 aa17.88■□□□□ 0.45
LINC01116-202ENST00000339037 TRPC6Q9Y210 931 aa17.88■□□□□ 0.45
LINC01116-202ENST00000339037 TTC3P53804 2025 aa17.88■□□□□ 0.45
LINC01116-202ENST00000339037 M0QZ92 97 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 SLC27A2O14975 620 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 CSPG5O95196 566 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 MMP1P03956 469 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 CLUL1Q15846 466 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 LINC01599Q8WXQ3 324 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 PCYT2Q99447 389 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 SDF4Q9BRK5 362 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 FTHL17Q9BXU8 183 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 LRRC2Q9BYS8 371 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 SQORQ9Y6N5 450 aa17.87■□□□□ 0.45
LINC01116-202ENST00000339037 POTEB3A0JP26 581 aa17.86■□□□□ 0.45
LINC01116-202ENST00000339037 TMEM62Q0P6H9 643 aa17.86■□□□□ 0.45
LINC01116-202ENST00000339037 CREB3L3Q68CJ9 461 aa17.86■□□□□ 0.45
LINC01116-202ENST00000339037 POTEBQ6S5H4 581 aa17.86■□□□□ 0.45
LINC01116-202ENST00000339037 SGMS1Q86VZ5 419 aa17.86■□□□□ 0.45
LINC01116-202ENST00000339037 POP1Q99575 1024 aaKnown RBP17.86■□□□□ 0.45
LINC01116-202ENST00000339037 MXRA8Q9BRK3 442 aa17.86■□□□□ 0.45
LINC01116-202ENST00000339037 ALG13Q9NP73 1137 aaKnown RBP17.86■□□□□ 0.45
LINC01116-202ENST00000339037 RYDENQ9NUL5 291 aaKnown RBP17.86■□□□□ 0.45
LINC01116-202ENST00000339037 TRPV2Q9Y5S1 764 aa17.86■□□□□ 0.45
LINC01116-202ENST00000339037 C19orf67A6NJJ6 358 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 ACTR2P61160 394 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 DLX2Q07687 328 aaPredicted RBP17.85■□□□□ 0.45
LINC01116-202ENST00000339037 PAK2Q13177 524 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 SMAD2Q15796 467 aaKnown RBP17.85■□□□□ 0.45
LINC01116-202ENST00000339037 WWC2Q6AWC2 1192 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 NPAS4Q8IUM7 802 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 CMTR2Q8IYT2 770 aaKnown RBP17.85■□□□□ 0.45
LINC01116-202ENST00000339037 CYP2W1Q8TAV3 490 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 P2RX5Q93086 422 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 PPP2R3CQ969Q6 453 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 UPF3BQ9BZI7 483 aaKnown RBP17.85■□□□□ 0.45
LINC01116-202ENST00000339037 IGFLR1Q9H665 355 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 PADI3Q9ULW8 664 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 PLAGL2Q9UPG8 496 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 IGSF9BQ9UPX0 1349 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 PCDHA2Q9Y5H9 948 aa17.85■□□□□ 0.45
LINC01116-202ENST00000339037 MRPL42Q9Y6G3 142 aaKnown RBP17.85■□□□□ 0.45
LINC01116-202ENST00000339037 NFASCO94856 1347 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 TBX10O75333 385 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 STAG3L1P0CL83 205 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 GTF2F1P35269 517 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC01116-202ENST00000339037 STAT5BP51692 787 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 NAPAP54920 295 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 PLCB4Q15147 1175 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 CEP55Q53EZ4 464 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 PPP1R18Q6NYC8 613 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 SYNE3Q6ZMZ3 975 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 PLPPR4Q7Z2D5 763 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 SKAP1Q86WV1 359 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 TEX2Q8IWB9 1127 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 CRIPAKQ8N1N5 446 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 TRAPPC12Q8WVT3 735 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 ESYT1Q9BSJ8 1104 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 ANO2Q9NQ90 1003 aa17.84■□□□□ 0.45
LINC01116-202ENST00000339037 CNTNAP5Q8WYK1 1306 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 MBTPS2O43462 519 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 FOSP01100 380 aaPredicted RBP17.83■□□□□ 0.44
LINC01116-202ENST00000339037 SCG2P13521 617 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 IRS1P35568 1242 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 ITGB3BPQ13352 177 aaPredicted RBP17.83■□□□□ 0.44
LINC01116-202ENST00000339037 SMAD4Q13485 552 aaKnown RBP17.83■□□□□ 0.44
LINC01116-202ENST00000339037 CAMK1Q14012 370 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 NECTIN1Q15223 517 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 PAN2Q504Q3 1202 aaKnown RBP17.83■□□□□ 0.44
LINC01116-202ENST00000339037 NAALADL2Q58DX5 795 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 TYW1BQ6NUM6 668 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 RTN4RL1Q86UN2 441 aaPredicted RBP17.83■□□□□ 0.44
LINC01116-202ENST00000339037 PGBD1Q96JS3 809 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 ANO3Q9BYT9 981 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 CELF4Q9BZC1 486 aaKnown RBP17.83■□□□□ 0.44
LINC01116-202ENST00000339037 RIC8AQ9NPQ8 531 aa17.83■□□□□ 0.44
LINC01116-202ENST00000339037 RBM28Q9NW13 759 aaKnown RBP17.83■□□□□ 0.44
LINC01116-202ENST00000339037 ATG2AQ2TAZ0 1938 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 KDM3AQ9Y4C1 1321 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 SMIM35A0A1B0GVV1 85 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 LINC01565O15544 149 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 ITGB1P05556 798 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 ARP10275 920 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 NDUFV1P49821 464 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 SLC26A2P50443 739 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 ADCY7P51828 1080 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 KRT76Q01546 638 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 APOA5Q6Q788 366 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 AGO4Q9HCK5 861 aaKnown RBP17.82■□□□□ 0.44
LINC01116-202ENST00000339037 CD207Q9UJ71 328 aa17.82■□□□□ 0.44
LINC01116-202ENST00000339037 DNAJB1P25685 340 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms