RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 EEPD1Q7L9B9 569 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 CPLX4Q7Z7G2 160 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 EHD4Q9H223 541 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 FBXO40Q9UH90 709 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 MYO1FO00160 1098 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 WDR46O15213 610 aaKnown RBP6.84□□□□□ -1.31
PRKDC-202ENST00000338368 SLC16A4O15374 487 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 GCLMP48507 274 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 PPP2R5AQ15172 486 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 BRDTQ58F21 947 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-202ENST00000338368 SEPT14Q6ZU15 432 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 APBB1IPQ7Z5R6 666 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-202ENST00000338368 SH3RF1Q7Z6J0 888 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 ST7Q9NRC1 585 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 HAUS6Q7Z4H7 955 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 DEFB132Q7Z7B7 95 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 MCPH1Q8NEM0 835 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 KRT12Q99456 494 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 IKBKGQ9Y6K9 419 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 EIF3DO15371 548 aaKnown RBP eCLIP6.84□□□□□ -1.317e-8■□□□□ 10.8
PRKDC-202ENST00000338368 KCNQ5Q9NR82 932 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 TMX2Q9Y320 296 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 GAKO14976 1311 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 C3P01024 1663 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 CTNNA1P35221 906 aaKnown RBP6.84□□□□□ -1.31
PRKDC-202ENST00000338368 TMEM39BQ9GZU3 492 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 LDHAP00338 332 aaKnown RBP6.84□□□□□ -1.31
PRKDC-202ENST00000338368 PPFIA1Q13136 1202 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 C10orf76Q5T2E6 689 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 SWSAP1Q6NVH7 229 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 INTS8Q75QN2 995 aaKnown RBP6.84□□□□□ -1.31
PRKDC-202ENST00000338368 CATSPER3Q86XQ3 398 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 WDR24Q96S15 920 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 IDI2Q9BXS1 227 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 EPC1Q9H2F5 836 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 ANKFY1Q9P2R3 1169 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 GABBR1Q9UBS5 961 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 NRXN3Q9Y4C0 1643 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 PITPNM2Q9BZ72 1349 aa6.84□□□□□ -1.31
PRKDC-202ENST00000338368 PDXDC1Q6P996 788 aa6.84□□□□□ -1.32
PRKDC-202ENST00000338368 NYAP1Q6ZVC0 841 aa6.84□□□□□ -1.32
PRKDC-202ENST00000338368 ZNF233A6NK53 670 aa6.84□□□□□ -1.32
PRKDC-202ENST00000338368 PPP2R5EQ16537 467 aa6.84□□□□□ -1.32
PRKDC-202ENST00000338368 NT5DC1Q5TFE4 455 aa6.84□□□□□ -1.32
PRKDC-202ENST00000338368 ACER1Q8TDN7 264 aa6.84□□□□□ -1.32
PRKDC-202ENST00000338368 RPAP3Q9H6T3 665 aaPredicted RBP6.84□□□□□ -1.32
PRKDC-202ENST00000338368 TUFT1Q9NNX1 390 aa6.84□□□□□ -1.32
PRKDC-202ENST00000338368 A6NNZ2 444 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 SRGAP2O75044 1071 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 SHMT1P34896 483 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 CAP2P40123 477 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 CCNA1P78396 465 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 COG2Q14746 738 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 TUBB8Q3ZCM7 444 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 ZNF653Q96CK0 615 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 INO80B-WBP1J3KQ70 363 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 ABCD1P33897 745 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 ECE1P42892 770 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 PSMC5P62195 406 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 MDM2Q00987 491 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 MICALL2Q8IY33 904 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 LPAR1Q92633 364 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 TRIM6Q9C030 488 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 INO80BQ9C086 356 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 EPB41L5Q9HCM4 733 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 PARP2Q9UGN5 583 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 CNOT7Q9UIV1 285 aaKnown RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 MRFAP1Q9Y605 127 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 NDUFAB1O14561 156 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 NR3C2P08235 984 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 ZNF18P17022 549 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 GFPT1Q06210 699 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 C2orf54Q08AI8 447 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 FUT2Q10981 343 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 BAATQ14032 418 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 KRT71Q3SY84 523 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 APOBEC3HQ6NTF7 200 aaKnown RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 FRMD5Q7Z6J6 570 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 GMCL1Q96IK5 515 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 PAIP2Q9BPZ3 127 aaKnown RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 ODF2LQ9ULJ1 636 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 PGRMC1O00264 195 aaKnown RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 FGRP09769 529 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 HMGCS2P54868 508 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 RIT2Q99578 217 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 SH2D3AQ9BRG2 576 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 MXRA8Q9BRK3 442 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 A0A087X0B3 334 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 CCDC91Q7Z6B0 441 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 CROCCP2Q86T23 111 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 FBXO28Q9NVF7 368 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 PIK3C2AO00443 1686 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 R3HDM1Q15032 1099 aaKnown RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 CDKAL1Q5VV42 579 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 BEGAINQ9BUH8 593 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 KCNK9Q9NPC2 374 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 SCAF8Q9UPN6 1271 aaKnown RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 NSFP46459 744 aaKnown RBP6.83□□□□□ -1.32
PRKDC-202ENST00000338368 HIP1RO75146 1068 aa6.83□□□□□ -1.32
PRKDC-202ENST00000338368 CASP8Q14790 479 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms