RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 NT5C3AQ9H0P0 336 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 TMBIM4Q9HC24 238 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 ETAA1Q9NY74 926 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 ZFP69BQ9UJL9 534 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 AGTPBP1Q9UPW5 1226 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 PTPRMP28827 1452 aa14.3□□□□□ -0.12
COL2A1-201ENST00000337299 ZCCHC18P0CG32 403 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 ADCY7P51828 1080 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 MRPL12P52815 198 aaKnown RBP14.29□□□□□ -0.12
COL2A1-201ENST00000337299 OLFML2BQ68BL8 750 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 RCSD1Q6JBY9 416 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 KCNV1Q6PIU1 500 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 LRRC43Q8N309 656 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 CNBD1Q8NA66 436 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 ZCWPW1Q9H0M4 648 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 TMOD2Q9NZR1 351 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 GCNT4Q9P109 453 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 MCM8Q9UJA3 840 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 PCDHA4Q9UN74 947 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 DIP2CQ9Y2E4 1556 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 TOB1P50616 345 aaPredicted RBP14.29□□□□□ -0.12
COL2A1-201ENST00000337299 SLC29A2Q14542 456 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 TXNRD1Q16881 649 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 DPH6Q7L8W6 267 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 TBCKQ8TEA7 893 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 MAML1Q92585 1016 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 FAM161BQ96MY7 647 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 ALG13Q9NP73 1137 aaKnown RBP14.29□□□□□ -0.12
COL2A1-201ENST00000337299 SEC31BQ9NQW1 1179 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 BZW2Q9Y6E2 419 aaKnown RBP14.29□□□□□ -0.12
COL2A1-201ENST00000337299 KIDINS220Q9ULH0 1771 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 GRID2IPA4D2P6 1211 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 DNAJC6O75061 913 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 BCRP11274 1271 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 MRPS35P82673 323 aaKnown RBP14.29□□□□□ -0.12
COL2A1-201ENST00000337299 PABPC4Q13310 644 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL2A1-201ENST00000337299 PARP10Q53GL7 1025 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 PALM2Q8IXS6 379 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 ZBTB38Q8NAP3 1195 aaPredicted RBP14.29□□□□□ -0.12
COL2A1-201ENST00000337299 AGAP11Q8TF27 550 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 ZNF233A6NK53 670 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 NVLO15381 856 aaKnown RBP14.29□□□□□ -0.12
COL2A1-201ENST00000337299 NMT2O60551 498 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 ELF3P78545 371 aaPredicted RBP14.29□□□□□ -0.12
COL2A1-201ENST00000337299 CDKAL1Q5VV42 579 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 PDXDC1Q6P996 788 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 PPM1KQ8N3J5 372 aa14.29□□□□□ -0.12
COL2A1-201ENST00000337299 PRPF6O94906 941 aaKnown RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 LRIG3Q6UXM1 1119 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 NSMFQ6X4W1 530 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 MAPKAPK5Q8IW41 473 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 GLG1Q92896 1179 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 CDCA7Q9BWT1 371 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 ATG3Q9NT62 314 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 INO80Q9ULG1 1556 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 FRMPD2Q68DX3 1309 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 STK36Q9NRP7 1315 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 AFPP02771 609 aaKnown RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 TARSP26639 723 aaKnown RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 CTSWP56202 376 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 SKOR1P84550 965 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 SYT2Q8N9I0 419 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 USP38Q8NB14 1042 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 NYXQ9GZU5 481 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 ISCUQ9H1K1 167 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 SMYD3Q9H7B4 428 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 CEP72Q9P209 647 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 DCTN3O75935 186 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 CRKLP46109 303 aaKnown RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 COPS2P61201 443 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 EPM2AIP1Q7L775 607 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-201ENST00000337299 TTC16Q8NEE8 873 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 ANLNQ9NQW6 1124 aa14.28□□□□□ -0.12
COL2A1-201ENST00000337299 RNF225M0QZC1 329 aaPredicted RBP14.27□□□□□ -0.12
COL2A1-201ENST00000337299 AGBL2Q5U5Z8 902 aa14.27□□□□□ -0.12
COL2A1-201ENST00000337299 TYW1Q9NV66 732 aaKnown RBP14.27□□□□□ -0.12
COL2A1-201ENST00000337299 POTEMA6NI47 508 aa14.27□□□□□ -0.12
COL2A1-201ENST00000337299 HIBADHP31937 336 aaKnown RBP14.27□□□□□ -0.12
COL2A1-201ENST00000337299 SH3BGRP55822 239 aaPredicted RBP14.27□□□□□ -0.12
COL2A1-201ENST00000337299 ATP2C1P98194 919 aaPredicted RBP14.27□□□□□ -0.12
COL2A1-201ENST00000337299 PPP2R5CQ13362 524 aa14.27□□□□□ -0.12
COL2A1-201ENST00000337299 TNIP1Q15025 636 aa14.27□□□□□ -0.12
COL2A1-201ENST00000337299 HLFQ16534 295 aa14.27□□□□□ -0.12
COL2A1-201ENST00000337299 SMIM5Q71RC9 77 aa14.27□□□□□ -0.12
COL2A1-201ENST00000337299 CREG2Q8IUH2 290 aa14.27□□□□□ -0.12
COL2A1-201ENST00000337299 IGDCC4Q8TDY8 1250 aa14.27□□□□□ -0.12
COL2A1-201ENST00000337299 RIC8AQ9NPQ8 531 aa14.27□□□□□ -0.12
COL2A1-201ENST00000337299 MEIS1O00470 390 aa14.27□□□□□ -0.13
COL2A1-201ENST00000337299 FERP16591 822 aa14.27□□□□□ -0.13
COL2A1-201ENST00000337299 MTMR8Q96EF0 704 aa14.27□□□□□ -0.13
COL2A1-201ENST00000337299 XDHP47989 1333 aa14.27□□□□□ -0.13
COL2A1-201ENST00000337299 ARL6IP4Q66PJ3 421 aaKnown RBP14.27□□□□□ -0.13
COL2A1-201ENST00000337299 TTLL11Q8NHH1 800 aa14.27□□□□□ -0.13
COL2A1-201ENST00000337299 KAZALD1Q96I82 304 aa14.27□□□□□ -0.13
COL2A1-201ENST00000337299 TCHPQ9BT92 498 aa14.27□□□□□ -0.13
COL2A1-201ENST00000337299 EMILIN3Q9NT22 766 aa14.27□□□□□ -0.13
COL2A1-201ENST00000337299 TXNDC16Q9P2K2 825 aa14.27□□□□□ -0.13
COL2A1-201ENST00000337299 ANGPTL2Q9UKU9 493 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms