RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 TTI1O43156 1089 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 TEX11Q8IYF3 940 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 UIMC1Q96RL1 719 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 RIC8AQ9NPQ8 531 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 IL17RBQ9NRM6 502 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 SEC63Q9UGP8 760 aaKnown RBP14.98□□□□□ -0.01
SYNE3-201ENST00000334258 UTP11Q9Y3A2 253 aaKnown RBP14.98□□□□□ -0.01
SYNE3-201ENST00000334258 USP11P51784 963 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 GRM4Q14833 912 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 ADAT2Q7Z6V5 191 aaKnown RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 CCDC113Q9H0I3 377 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 BMP2KQ9NSY1 1161 aaPredicted RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 PNMA2Q9UL42 364 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 ABCB11O95342 1321 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 ECHS1P30084 290 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 GRIK5Q16478 980 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 NBPF9Q3BBW0 867 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 AGBL2Q5U5Z8 902 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 DAAM2Q86T65 1068 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 TBC1D1Q86TI0 1168 aaPredicted RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 METTL13Q8N6R0 699 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 CCDC63Q8NA47 563 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 SYN2Q92777 582 aaPredicted RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 NSUN4Q96CB9 384 aaKnown RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 FAXDC2Q96IV6 333 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.97□□□□□ -0.012e-6■■□□□ 12
SYNE3-201ENST00000334258 RAB34Q9BZG1 259 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 STK17AQ9UEE5 414 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 CAND2O75155 1236 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 VIMP08670 466 aaKnown RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 PTK2Q05397 1052 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 MYO1EQ12965 1108 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 DIXDC1Q155Q3 683 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 SLC35G1Q2M3R5 365 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 FAM133BQ5BKY9 247 aaKnown RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 DAGLBQ8NCG7 672 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 THOC1Q96FV9 657 aaKnown RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 XPO6Q96QU8 1125 aaKnown RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 NOD2Q9HC29 1040 aa14.97□□□□□ -0.01
SYNE3-201ENST00000334258 BSDC1Q9NW68 430 aaPredicted RBP14.97□□□□□ -0.01
SYNE3-201ENST00000334258 CNTNAP4Q9C0A0 1308 aa14.96□□□□□ -0.01
SYNE3-201ENST00000334258 F8W031 263 aaPredicted RBP14.96□□□□□ -0.01
SYNE3-201ENST00000334258 PRR5LQ6MZQ0 368 aa14.96□□□□□ -0.01
SYNE3-201ENST00000334258 REXO1Q8N1G1 1221 aaKnown RBP14.96□□□□□ -0.01
SYNE3-201ENST00000334258 SCFD2Q8WU76 684 aa14.96□□□□□ -0.01
SYNE3-201ENST00000334258 TRIM6Q9C030 488 aaPredicted RBP14.96□□□□□ -0.01
SYNE3-201ENST00000334258 IRAK4Q9NWZ3 460 aa14.96□□□□□ -0.01
SYNE3-201ENST00000334258 TMEM260Q9NX78 707 aa14.96□□□□□ -0.01
SYNE3-201ENST00000334258 CCT8L1PA6NM43 557 aa14.96□□□□□ -0.02
SYNE3-201ENST00000334258 ACTN1P12814 892 aa14.96□□□□□ -0.02
SYNE3-201ENST00000334258 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.02
SYNE3-201ENST00000334258 XRCC4Q13426 336 aa14.96□□□□□ -0.02
SYNE3-201ENST00000334258 CRYMQ14894 314 aa14.96□□□□□ -0.02
SYNE3-201ENST00000334258 FAM26FQ5R3K3 315 aa14.96□□□□□ -0.02
SYNE3-201ENST00000334258 ALKBH5Q6P6C2 394 aaKnown RBP14.96□□□□□ -0.02
SYNE3-201ENST00000334258 SLC44A5Q8NCS7 719 aa14.96□□□□□ -0.02
SYNE3-201ENST00000334258 CCT6BQ92526 530 aa14.96□□□□□ -0.02
SYNE3-201ENST00000334258 BAZ2AQ9UIF9 1905 aaKnown RBP14.96□□□□□ -0.02
SYNE3-201ENST00000334258 DUOX1Q9NRD9 1551 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 SERPINB2P05120 415 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 MMEP08473 750 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 MYBP10242 640 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 GYS1P13807 737 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 DRD4P21917 467 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 COBLL1Q53SF7 1204 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 TMC3Q7Z5M5 1100 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 DZIP1Q86YF9 867 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 UHMK1Q8TAS1 419 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 PNMA5Q96PV4 448 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 SAMD15Q9P1V8 674 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 TMEM59LQ9UK28 342 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 ATP6V1G2O95670 118 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 IFNAR2P48551 515 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 MRPL12P52815 198 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 ELF3P78545 371 aaPredicted RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 ACCSLQ4AC99 568 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 ARMC3Q5W041 872 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 RAD54LQ92698 747 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 P3H4Q92791 437 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 FMO2Q99518 471 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 ELAC2Q9BQ52 826 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 NUDT12Q9BQG2 462 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 ZMYND12Q9H0C1 365 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 KDM4CQ9H3R0 1056 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 CNOT10Q9H9A5 744 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 ATP6V0A4Q9HBG4 840 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 PANK4Q9NVE7 773 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 SKAP2O75563 359 aaPredicted RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 KRT18P05783 430 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 BYSLQ13895 437 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 SF3B3Q15393 1217 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 FMNL3Q8IVF7 1028 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 EIF1ADQ8N9N8 165 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 ACTRT1Q8TDG2 376 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 RPGRQ92834 1020 aaKnown RBP14.95□□□□□ -0.02
SYNE3-201ENST00000334258 CUL5Q93034 780 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 TRIM51Q9BSJ1 452 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 LRRC27Q9C0I9 530 aa14.95□□□□□ -0.02
SYNE3-201ENST00000334258 KLHL33A6NCF5 533 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 F8VZ95 297 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms