RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 MAP7D3Q8IWC1 876 aa12.2□□□□□ -0.46
POLR1B-202ENST00000333990 SMAP1Q8IYB5 467 aaPredicted RBP12.2□□□□□ -0.46
POLR1B-202ENST00000333990 THNSL1Q8IYQ7 743 aa12.2□□□□□ -0.46
POLR1B-202ENST00000333990 STXBP3O00186 592 aa12.2□□□□□ -0.46
POLR1B-202ENST00000333990 TCP1P17987 556 aaKnown RBP12.2□□□□□ -0.46
POLR1B-202ENST00000333990 CDC25BP30305 580 aa12.2□□□□□ -0.46
POLR1B-202ENST00000333990 GUCY1A2P33402 732 aa12.2□□□□□ -0.46
POLR1B-202ENST00000333990 MRPS9P82933 396 aaKnown RBP12.2□□□□□ -0.46
POLR1B-202ENST00000333990 ZBED6P86452 979 aa12.2□□□□□ -0.46
POLR1B-202ENST00000333990 KYAT1Q16773 422 aa12.2□□□□□ -0.46
POLR1B-202ENST00000333990 GUF1Q8N442 669 aaKnown RBP12.2□□□□□ -0.46
POLR1B-202ENST00000333990 TYW1Q9NV66 732 aaKnown RBP12.2□□□□□ -0.46
POLR1B-202ENST00000333990 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
POLR1B-202ENST00000333990 ASIC3Q9UHC3 531 aa12.2□□□□□ -0.46
POLR1B-202ENST00000333990 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
POLR1B-202ENST00000333990 ABCC6O95255 1503 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 ICAM1P05362 532 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 RHOXF2BP0C7M4 288 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 CFAP58Q5T655 872 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 POTEGQ6S5H5 508 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 RSRC2Q7L4I2 434 aaKnown RBP12.19□□□□□ -0.46
POLR1B-202ENST00000333990 RHOXF2Q9BQY4 288 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 DENND3A2RUS2 1198 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 KIAA0391O15091 583 aaKnown RBP12.19□□□□□ -0.46
POLR1B-202ENST00000333990 MAGEB2O15479 319 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 ZNF568Q3ZCX4 644 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 NAALADL2Q58DX5 795 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 ZNF667Q5HYK9 610 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 TRIM50Q86XT4 487 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 IFT20Q8IY31 132 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 MRPL4Q9BYD3 311 aaKnown RBP12.19□□□□□ -0.46
POLR1B-202ENST00000333990 CXCL11O14625 94 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 ABL1P00519 1130 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 EVCP57679 992 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 OSTNP61366 133 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 CUL4BQ13620 913 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 KRT81Q14533 505 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
POLR1B-202ENST00000333990 FMR1NBQ8N0W7 255 aaPredicted RBP12.19□□□□□ -0.46
POLR1B-202ENST00000333990 MROH8Q9H579 483 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 BCL2L12Q9HB09 334 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 KCND2Q9NZV8 630 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 SAR1BQ9Y6B6 198 aa12.19□□□□□ -0.46
POLR1B-202ENST00000333990 IVLP07476 585 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 CASP14P31944 242 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 COASYQ13057 564 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 SCYL2Q6P3W7 929 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 C11orf57Q6ZUT1 292 aaPredicted RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 CCDC105Q8IYK2 499 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 TTC39CQ8N584 583 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 RDM1Q8NG50 284 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 KCNB2Q92953 911 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 ZKSCAN4Q969J2 545 aaPredicted RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 SALL3Q9BXA9 1300 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 SFI1A8K8P3 1242 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 WNT10BO00744 389 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 THAP12O43422 761 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 DSTYKQ6XUX3 929 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 GPIHBP1Q8IV16 184 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 TMEM106CQ9BVX2 250 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 MRPL47Q9HD33 250 aaKnown RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 ODF2LQ9ULJ1 636 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 HYOU1Q9Y4L1 999 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 PHLPP1O60346 1717 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 XRN1Q8IZH2 1706 aaKnown RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 COL14A1Q05707 1796 aaKnown RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 ALDH1A1P00352 501 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 ATP5DP30049 168 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 KNOP1Q1ED39 458 aaKnown RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 NBPF12Q5TAG4 269 aaPredicted RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 VGLL2Q8N8G2 317 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 GMCL1P1Q8NEA9 526 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 FAM149B1Q96BN6 582 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 LRRC4Q9HBW1 653 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 GOLGA6CA6NDK9 693 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 GOLGA6BA6NDN3 693 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 DDTLA6NHG4 134 aaPredicted RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 NR3C1P04150 777 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 GOLGA6DP0CG33 693 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 RHPN2Q8IUC4 686 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 KIF2CQ99661 725 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 MXRA8Q9BRK3 442 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 NSRP1Q9H0G5 558 aaKnown RBP12.18□□□□□ -0.46
POLR1B-202ENST00000333990 GOLGA6AQ9NYA3 693 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 GDAQ9Y2T3 454 aa12.18□□□□□ -0.46
POLR1B-202ENST00000333990 TYW5A2RUC4 315 aaKnown RBP12.17□□□□□ -0.46
POLR1B-202ENST00000333990 SLC16A4O15374 487 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 CYP2B6P20813 491 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 ELF1P32519 619 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 FCGRTP55899 365 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 CRY2Q49AN0 593 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 C10orf76Q5T2E6 689 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 PPP1R16BQ96T49 567 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 RAB17Q9H0T7 212 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 POLR3FQ9H1D9 316 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms