RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 OLFML2BQ68BL8 750 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 CREG2Q8IUH2 290 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 CHMP6Q96FZ7 201 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 DYDC2Q96IM9 177 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 VCXQ9H320 206 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 TAF1DQ9H5J8 278 aaPredicted RBP12.89□□□□□ -0.35
LIMK2-202ENST00000333611 ANKIB1Q9P2G1 1089 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 LNPEPQ9UIQ6 1025 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 MGRN1O60291 552 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 SHBGP04278 402 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 KRT18P05783 430 aaKnown RBP12.89□□□□□ -0.35
LIMK2-202ENST00000333611 MYL1P05976 194 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 HNRNPCP07910 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
LIMK2-202ENST00000333611 UBE4AQ14139 1066 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 CFAP221Q4G0U5 840 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 SV2BQ7L1I2 683 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 OTUD6AQ7L8S5 288 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 BRIP1Q9BX63 1249 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 RCAN1P53805 252 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 POLR2FP61218 127 aaKnown RBP12.89□□□□□ -0.35
LIMK2-202ENST00000333611 AMPD3Q01432 767 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 TSNAXIP1Q2TAA8 658 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 RUFY4Q6ZNE9 571 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 RNF168Q8IYW5 571 aaPredicted RBP12.89□□□□□ -0.35
LIMK2-202ENST00000333611 TBCKQ8TEA7 893 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 MAIP1Q8WWC4 291 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 NSUN4Q96CB9 384 aaKnown RBP12.89□□□□□ -0.35
LIMK2-202ENST00000333611 DHTKD1Q96HY7 919 aaPredicted RBP12.89□□□□□ -0.35
LIMK2-202ENST00000333611 YIPF2Q9BWQ6 316 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 UBE2OQ9C0C9 1292 aaKnown RBP12.89□□□□□ -0.35
LIMK2-202ENST00000333611 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 CHMP2BQ9UQN3 213 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 ZNF711Q9Y462 761 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 BAZ2AQ9UIF9 1905 aaKnown RBP12.88□□□□□ -0.35
LIMK2-202ENST00000333611 ERVV-1B6SEH8 477 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 NONOQ15233 471 aaKnown RBP eCLIP12.88□□□□□ -0.35
LIMK2-202ENST00000333611 ZNF449Q6P9G9 518 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 VSIG1Q86XK7 387 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 GALNT8Q9NY28 637 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 SALL4Q9UJQ4 1053 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 MYH6P13533 1939 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 CEP104O60308 925 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 FESP07332 822 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 GBP1P32455 592 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 ABL2P42684 1182 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 XRCC4Q13426 336 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 BLMHQ13867 455 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 VWA3BQ502W6 1294 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
LIMK2-202ENST00000333611 GALNT17Q6IS24 598 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 CNNM4Q6P4Q7 775 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 CCDC25Q86WR0 208 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 LRRC34Q8IZ02 419 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 SNX29Q8TEQ0 813 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 MTMR8Q96EF0 704 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 SEMA6BQ9H3T3 888 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 SLAIN2Q9P270 581 aa12.88□□□□□ -0.35
LIMK2-202ENST00000333611 UBTFL6P0CB48 400 aaPredicted RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 ZCCHC18P0CG32 403 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 FECHP22830 423 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 ITGB3BPQ13352 177 aaPredicted RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 SLC5A9Q2M3M2 681 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 TXNRD3Q86VQ6 643 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 TBC1D5Q92609 795 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 COA7Q96BR5 231 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 INTS9Q9NV88 658 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 CNOT8Q9UFF9 292 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 ANAPC4Q9UJX5 808 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 FBXL5Q9UKA1 691 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 CYTH3O43739 400 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 SUPT3HO75486 399 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 PALMO75781 387 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 NQO1P15559 274 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 RCN2Q14257 317 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 GLE1Q53GS7 698 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 NUGGCQ68CJ6 796 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 TRPM8Q7Z2W7 1104 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 C4orf32Q8N8J7 132 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 KIAA0895Q8NCT3 520 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 CCHCR1Q8TD31 782 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 CASKIN2Q8WXE0 1202 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 DDX50Q9BQ39 737 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 LSM14BQ9BX40 385 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 ETNK1Q9HBU6 452 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 METTL5Q9NRN9 209 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 SWAP70Q9UH65 585 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 ADAMTS1Q9UHI8 967 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 TCP1P17987 556 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 MSH2P43246 934 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 DHX9Q08211 1270 aaKnown RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 C1QTNF12Q5T7M4 302 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 RFX8Q6ZV50 586 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 GDAP1Q8TB36 358 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 SH3RF3Q8TEJ3 882 aaPredicted RBP12.87□□□□□ -0.35
LIMK2-202ENST00000333611 PIGSQ96S52 555 aa12.87□□□□□ -0.35
LIMK2-202ENST00000333611 PREBQ9HCU5 417 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms