RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TCERG1LQ5VWI1 586 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 DPY19L2P1Q6NXN4 242 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 SYN2Q92777 582 aaPredicted RBP13.5□□□□□ -0.25
VPS33B-201ENST00000333371 ANO3Q9BYT9 981 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 NT5C3AQ9H0P0 336 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 DHX36Q9H2U1 1008 aaKnown RBP13.5□□□□□ -0.25
VPS33B-201ENST00000333371 CENPHQ9H3R5 247 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 EBAG9O00559 213 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 TNFRSF8P28908 595 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 ERVK-9P63128 1117 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 TCP10Q12799 353 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 PAK2Q13177 524 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 HYIQ5T013 277 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 USP38Q8NB14 1042 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 SPAG5Q96R06 1193 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 REEP2Q9BRK0 252 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 AIPL1Q9NZN9 384 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
VPS33B-201ENST00000333371 CETN3O15182 167 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 CEP104O60308 925 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 EPB41P11171 864 aaKnown RBP13.49□□□□□ -0.25
VPS33B-201ENST00000333371 UCHL3P15374 230 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 RXRBP28702 533 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 RBM5P52756 815 aaKnown RBP eCLIP13.49□□□□□ -0.25
VPS33B-201ENST00000333371 HLTFQ14527 1009 aaKnown RBP eCLIP13.49□□□□□ -0.25
VPS33B-201ENST00000333371 USH1GQ495M9 461 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 KCNMB3Q9NPA1 279 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 SWAP70Q9UH65 585 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 TSKSQ9UJT2 592 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 AKAP3O75969 853 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 GIT2Q14161 759 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 CDC37Q16543 378 aaPredicted RBP13.49□□□□□ -0.25
VPS33B-201ENST00000333371 GLE1Q53GS7 698 aaKnown RBP13.49□□□□□ -0.25
VPS33B-201ENST00000333371 CDC42EP5Q6NZY7 148 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 HHIPL2Q6UWX4 724 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 PODNQ7Z5L7 613 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 TADA2BQ86TJ2 420 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 CYP2W1Q8TAV3 490 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 RUBCNQ92622 972 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 KAT2BQ92831 832 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 DDX47Q9H0S4 455 aaKnown RBP13.49□□□□□ -0.25
VPS33B-201ENST00000333371 NUCKS1Q9H1E3 243 aaKnown RBP13.49□□□□□ -0.25
VPS33B-201ENST00000333371 NEUROG2Q9H2A3 272 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 DNAJC18Q9H819 358 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 ITGA4P13612 1032 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 PON1P27169 355 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 CRKP46108 304 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 SEC24CP53992 1094 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 MARSP56192 900 aaKnown RBP13.49□□□□□ -0.25
VPS33B-201ENST00000333371 SEPT2Q15019 361 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 RPS6KA1Q15418 735 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 MAATS1Q7Z4T9 603 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 KIAA0825Q8IV33 1275 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 PPM1EQ8WY54 764 aa13.49□□□□□ -0.25
VPS33B-201ENST00000333371 SHTN1A0MZ66 631 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 NDUFAB1O14561 156 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 KIF4AO95239 1232 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 GNA14O95837 355 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 SPATA31C1P0DKV0 1188 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 HPDP32754 393 aaPredicted RBP13.48□□□□□ -0.25
VPS33B-201ENST00000333371 FLT3P36888 993 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 SPIRE1Q08AE8 756 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 PPP1R18Q6NYC8 613 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 KSR1Q8IVT5 923 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 LUC7LQ9NQ29 371 aaKnown RBP13.48□□□□□ -0.25
VPS33B-201ENST00000333371 KCNQ5Q9NR82 932 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 ARMCX3Q9UH62 379 aaPredicted RBP13.48□□□□□ -0.25
VPS33B-201ENST00000333371 NAGPAQ9UK23 515 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 PLAAQ9Y263 795 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 TMCO5BA8MYB1 307 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 MEIS2O14770 477 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 EEF2P13639 858 aaKnown RBP13.48□□□□□ -0.25
VPS33B-201ENST00000333371 GCFC2P16383 781 aaKnown RBP13.48□□□□□ -0.25
VPS33B-201ENST00000333371 ECHS1P30084 290 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 SKOR1P84550 965 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 EXOC3L4Q17RC7 722 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 CEP85LQ5SZL2 805 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 ALKBH5Q6P6C2 394 aaKnown RBP13.48□□□□□ -0.25
VPS33B-201ENST00000333371 EFCAB13Q8IY85 973 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 TAF4BQ92750 862 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 FAM107BQ9H098 131 aa13.48□□□□□ -0.25
VPS33B-201ENST00000333371 FRMD3A2A2Y4 597 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 FAM86B1E9PN63 330 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 FAM86B2P0C5J1 330 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 HOXA13P31271 388 aaPredicted RBP13.47□□□□□ -0.25
VPS33B-201ENST00000333371 ARHGAP4P98171 946 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 GPATCH4Q5T3I0 446 aaKnown RBP13.47□□□□□ -0.25
VPS33B-201ENST00000333371 STYK1Q6J9G0 422 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 GBP6Q6ZN66 633 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 METTL13Q8N6R0 699 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 RUSC1Q9BVN2 902 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 LRRC4CQ9HCJ2 640 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 RGL1Q9NZL6 768 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 PCDHB13Q9Y5F0 798 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 ZBTB39O15060 712 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 AFPP02771 609 aaKnown RBP13.47□□□□□ -0.25
VPS33B-201ENST00000333371 NR1D1P20393 614 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 KNOP1Q1ED39 458 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms