RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 SP2Q02086 613 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 ARHGAP1Q07960 439 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 CT47A1Q5JQC4 288 aaPredicted RBP10.58□□□□□ -0.72
C11orf54-201ENST00000331239 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.72
C11orf54-201ENST00000331239 EPSTI1Q96J88 318 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 ARHGAP39Q9C0H5 1083 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 SMARCAD1Q9H4L7 1026 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 KBTBD4Q9NVX7 518 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 FLRT1Q9NZU1 646 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 GABRQQ9UN88 632 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 IGSF9BQ9UPX0 1349 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 A0A1B0GVL5 298 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 GRIN1Q05586 938 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 LRMPQ12912 555 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 GRB10Q13322 594 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 CCDC144BQ3MJ40 725 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 CATSPER3Q86XQ3 398 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 TRIB2Q92519 343 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 MRFAP1L1Q96HT8 127 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 GPR20Q99678 358 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 SPC25Q9HBM1 224 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 BMP2KQ9NSY1 1161 aaPredicted RBP10.58□□□□□ -0.72
C11orf54-201ENST00000331239 PTPN22Q9Y2R2 807 aa10.58□□□□□ -0.72
C11orf54-201ENST00000331239 POTEMA6NI47 508 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 POLR2DO15514 142 aaKnown RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 ACTN4O43707 911 aaKnown RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 CCNE2O96020 404 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 CST5P28325 142 aaPredicted RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 GJA9P57773 515 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 XKR3Q5GH77 459 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 PDXDC2PQ6P474 469 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 SV2BQ7L1I2 683 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 CYFIP1Q7L576 1253 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 ZNF710Q8N1W2 664 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 RAD54LQ92698 747 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 PNMA5Q96PV4 448 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 NIFKQ9BYG3 293 aaKnown RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 NAT10Q9H0A0 1025 aaKnown RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 AP5M1Q9H0R1 490 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 AZI2Q9H6S1 392 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 NRBP2Q9NSY0 501 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 GSTTP1A0A1W2PQM5 241 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 EML1O00423 815 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 NOP56O00567 594 aaKnown RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 GTPBP6O43824 516 aaPredicted RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 GAS2O43903 313 aaKnown RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 SMC2O95347 1197 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 SMPD1P17405 629 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 ABCD1P33897 745 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 DGKDQ16760 1214 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 NT5DC1Q5TFE4 455 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 FAM43BQ6ZT52 329 aaPredicted RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 CTU1Q7Z7A3 348 aaKnown RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 SYT2Q8N9I0 419 aaPredicted RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 TRIML1Q8N9V2 468 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 CNNM3Q8NE01 707 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 RASSF8Q8NHQ8 419 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 SPATA33Q96N06 139 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 C7orf25Q9BPX7 421 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 JPH2Q9BR39 696 aaPredicted RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
C11orf54-201ENST00000331239 COL1A2P08123 1366 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 ZSWIM8A7E2V4 1837 aa10.57□□□□□ -0.72
C11orf54-201ENST00000331239 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 PVALEFA0A1B0GWK0 134 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 ARIH2O95376 493 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 HSPA8P11142 646 aaKnown RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 PLCG1P19174 1290 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 GRK4P32298 578 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 LY6KQ17RY6 165 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 DHX40Q8IX18 779 aaKnown RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 LARP4BQ92615 738 aaKnown RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 CCDC47Q96A33 483 aaKnown RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 TSEN34Q9BSV6 310 aaKnown RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 PRDM10Q9NQV6 1147 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 ZNF302Q9NR11 478 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 ZNF215Q9UL58 517 aaPredicted RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 MED24O75448 989 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 CABYRO75952 493 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 RPLP2P05387 115 aaKnown RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 PPP1R2P41236 205 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 ADCYAP1R1P41586 468 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 CACNB2Q08289 660 aaPredicted RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 CCL14Q16627 93 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 NAALADL2Q58DX5 795 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 SLC17A8Q8NDX2 589 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 SPATA20Q8TB22 786 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
C11orf54-201ENST00000331239 KCNN1Q92952 543 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 GSDMAQ96QA5 445 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 LXNQ9BS40 222 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 KATNAL1Q9BW62 490 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 PDGFCQ9NRA1 345 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 RMND1Q9NWS8 449 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 SAMM50Q9Y512 469 aa10.56□□□□□ -0.72
C11orf54-201ENST00000331239 A0A087WWV3 80 aa10.55□□□□□ -0.72
C11orf54-201ENST00000331239 RARBP10826 455 aa10.55□□□□□ -0.72
C11orf54-201ENST00000331239 CYP2C19P33261 490 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms