RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 YWHABP31946 246 aaKnown RBP17.49■□□□□ 0.39
PDGFB-201ENST00000331163 TMEM63BQ5T3F8 832 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 ANKRD40Q6AI12 368 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 TMCO3Q6UWJ1 677 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 ZIC5Q96T25 663 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 BLOC1S4Q9NUP1 217 aa17.49■□□□□ 0.39
PDGFB-201ENST00000331163 M0R2N6 131 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 CXCL11O14625 94 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 ITGB3BPQ13352 177 aaPredicted RBP17.48■□□□□ 0.39
PDGFB-201ENST00000331163 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.48■□□□□ 0.39
PDGFB-201ENST00000331163 LRRC15Q8TF66 581 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 PCDHA10Q9Y5I2 948 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 INO80B-WBP1J3KQ70 363 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 CAVIN2O95810 425 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 PPIL2Q13356 520 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 SPATA1Q5VX52 437 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 DPH6Q7L8W6 267 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 OTOP1Q7RTM1 612 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 CNOT6LQ96LI5 555 aaKnown RBP17.48■□□□□ 0.39
PDGFB-201ENST00000331163 INO80BQ9C086 356 aaPredicted RBP17.48■□□□□ 0.39
PDGFB-201ENST00000331163 RBPJLQ9UBG7 517 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 STK17AQ9UEE5 414 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 HIP1RO75146 1068 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 CLCN6P51797 869 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 SEZ6Q53EL9 994 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 ZBTB33Q86T24 672 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 P2RX5Q93086 422 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 FAM84AQ96KN4 292 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 FGFBP2Q9BYJ0 223 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 ZNF446Q9NWS9 450 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 LARSQ9P2J5 1176 aaKnown RBP17.48■□□□□ 0.39
PDGFB-201ENST00000331163 COL4A3BPQ9Y5P4 624 aa17.48■□□□□ 0.39
PDGFB-201ENST00000331163 MYO9BQ13459 2157 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 ACTR2P61160 394 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 PDIA5Q14554 519 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 PTPROQ16827 1216 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 HNRNPDLO14979 420 aaKnown RBP17.47■□□□□ 0.39
PDGFB-201ENST00000331163 AOC2O75106 756 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 SLITRK3O94933 977 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 TBC1D8O95759 1140 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 P4HBP07237 508 aaKnown RBP17.47■□□□□ 0.39
PDGFB-201ENST00000331163 FXR2P51116 673 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDGFB-201ENST00000331163 SETQ01105 290 aaPredicted RBP17.47■□□□□ 0.39
PDGFB-201ENST00000331163 TEX35Q5T0J7 233 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 LBX2Q6XYB7 198 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 MTMR8Q96EF0 704 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 PARVGQ9HBI0 331 aa17.47■□□□□ 0.39
PDGFB-201ENST00000331163 BICDL2A1A5D9 508 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 TISP43B9A030 160 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 CETN3O15182 167 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 CYP11B2P19099 503 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 ADCYAP1R1P41586 468 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 UGCGQ16739 394 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 SLC7A3Q8WY07 619 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 ATP6V0A1Q93050 837 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 DRC1Q96MC2 740 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 LZTFL1Q9NQ48 299 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 AKT3Q9Y243 479 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 SOCS7O14512 581 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 LMBRD2Q68DH5 695 aaPredicted RBP17.46■□□□□ 0.39
PDGFB-201ENST00000331163 RNF169Q8NCN4 708 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 IFT74Q96LB3 600 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 TUBGCP2Q9BSJ2 902 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 APOL6Q9BWW8 343 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 PGAP2Q9UHJ9 254 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 PSAPP07602 524 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 ZNF286BP0CG31 522 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 RPA1P27694 616 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 MCTP2Q6DN12 878 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 OTUD6AQ7L8S5 288 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 SAAL1Q96ER3 474 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 PARK7Q99497 189 aaKnown RBP17.46■□□□□ 0.39
PDGFB-201ENST00000331163 BEGAINQ9BUH8 593 aa17.46■□□□□ 0.39
PDGFB-201ENST00000331163 ZNHIT6Q9NWK9 470 aaKnown RBP17.46■□□□□ 0.39
PDGFB-201ENST00000331163 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.46■□□□□ 0.39
PDGFB-201ENST00000331163 SMTNP53814 917 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 PRKCEQ02156 737 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 MIS18BP1Q6P0N0 1132 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 C10orf67Q8IYJ2 551 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 DEPTORQ8TB45 409 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 CARD6Q9BX69 1037 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 JADE2Q9NQC1 790 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 ZNF302Q9NR11 478 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 TBC1D22BQ9NU19 505 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 PUF60Q9UHX1 559 aaKnown RBP17.45■□□□□ 0.38
PDGFB-201ENST00000331163 TUBE1Q9UJT0 475 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 ARAP2Q8WZ64 1704 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 GJB1P08034 283 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 TCF7P36402 384 aaPredicted RBP17.45■□□□□ 0.38
PDGFB-201ENST00000331163 CCZ1BP86790 482 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 CCZ1P86791 482 aaPredicted RBP17.45■□□□□ 0.38
PDGFB-201ENST00000331163 KRT31Q15323 416 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 E2F4Q16254 413 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 ETNPPLQ8TBG4 499 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 SPAG5Q96R06 1193 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 AGO4Q9HCK5 861 aaKnown RBP17.45■□□□□ 0.38
PDGFB-201ENST00000331163 MYH6P13533 1939 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 KRT9P35527 623 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 CLK2P49760 499 aaKnown RBP17.45■□□□□ 0.38
PDGFB-201ENST00000331163 ALDH5A1P51649 535 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms