RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 LINC00116Q8NCU8 138 aa15.75■□□□□ 0.11
SNX20-202ENST00000330943 P3H4Q92791 437 aa15.75■□□□□ 0.11
SNX20-202ENST00000330943 UIMC1Q96RL1 719 aa15.75■□□□□ 0.11
SNX20-202ENST00000330943 SLITRK6Q9H5Y7 841 aa15.75■□□□□ 0.11
SNX20-202ENST00000330943 BMP2KQ9NSY1 1161 aaPredicted RBP15.75■□□□□ 0.11
SNX20-202ENST00000330943 ROBO3Q96MS0 1386 aa15.75■□□□□ 0.11
SNX20-202ENST00000330943 NPHP3-ACAD11A0A0J9YXS1 232 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 FRMD3A2A2Y4 597 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 CAND2O75155 1236 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 ECM2O94769 699 aaPredicted RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 SLC8A1P32418 973 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 TNNI2P48788 182 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 SF3B3Q15393 1217 aaKnown RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 PPP1R7Q15435 360 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 HERC4Q5GLZ8 1057 aaPredicted RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 HIBCHQ6NVY1 386 aaPredicted RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 EP400NLQ6ZTU2 488 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 DAAM2Q86T65 1068 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 MAPKAPK5Q8IW41 473 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 MAGEC3Q8TD91 643 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 TBC1D31Q96DN5 1066 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 KDM4CQ9H3R0 1056 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 ZHX3Q9H4I2 956 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 BAIAP2L1Q9UHR4 511 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 ROBO1Q9Y6N7 1651 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 EDIL3O43854 480 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 MARCH6O60337 910 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 DNAJC8O75937 253 aaPredicted RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 TRIM37O94972 964 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 GCFC2P16383 781 aaKnown RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 HOXA7P31268 230 aaPredicted RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 MARSP56192 900 aaKnown RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 DIXDC1Q155Q3 683 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 TXNRD3Q86VQ6 643 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 CCDC197Q8NCU1 140 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 SELENOSQ9BQE4 189 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 CNOT10Q9H9A5 744 aaKnown RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 FAM114A2Q9NRY5 505 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 MYH14Q7Z406 1995 aaKnown RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 MGRN1O60291 552 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 RPSAP08865 295 aaKnown RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 UCHL3P15374 230 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 ADCY7P51828 1080 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 MRPL12P52815 198 aaKnown RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 CLNS1AP54105 237 aaKnown RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 ELF3P78545 371 aaPredicted RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 ERMARDQ5T6L9 678 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 CCDC65Q8IXS2 484 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 SCFD1Q8WVM8 642 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 GPR101Q96P66 508 aaPredicted RBP15.74■□□□□ 0.11
SNX20-202ENST00000330943 EYA3Q99504 573 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 FMO2Q99518 471 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 FAM129AQ9BZQ8 928 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 HDAC9Q9UKV0 1011 aa15.74■□□□□ 0.11
SNX20-202ENST00000330943 E9PMD0 336 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 FLOT1O75955 427 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 GHRP10912 638 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 SEPT2Q15019 361 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 TLCD1Q96CP7 247 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 KCTD10Q9H3F6 313 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 EMILIN3Q9NT22 766 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 FRMPD2Q68DX3 1309 aaPredicted RBP15.73■□□□□ 0.11
SNX20-202ENST00000330943 MAST2Q6P0Q8 1798 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 ESYT2A0FGR8 921 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 CCT8L1PA6NM43 557 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 CETN3O15182 167 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 PPP1R12BO60237 982 aaPredicted RBP15.73■□□□□ 0.11
SNX20-202ENST00000330943 ATP6V1G2O95670 118 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 MMEP08473 750 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 CHN1P15882 459 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 NR2F2P24468 414 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 RASGEF1CQ8N431 466 aa15.73■□□□□ 0.11
SNX20-202ENST00000330943 RBM46Q8TBY0 533 aaKnown RBP15.73■□□□□ 0.11
SNX20-202ENST00000330943 SMIM23A6NLE4 172 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 USP17L5A8MUK1 530 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 FGGP02679 453 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 SHBGP04278 402 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 H2AFZP0C0S5 128 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 NT5C2P49902 561 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 SPTY2D1Q68D10 685 aaPredicted RBP15.72■□□□□ 0.11
SNX20-202ENST00000330943 H2AFVQ71UI9 128 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 ADAT2Q7Z6V5 191 aaKnown RBP15.72■□□□□ 0.11
SNX20-202ENST00000330943 LMBR1Q8WVP7 490 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 ATP6V0A4Q9HBG4 840 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 NOD2Q9HC29 1040 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 SUCLA2Q9P2R7 463 aaPredicted RBP15.72■□□□□ 0.11
SNX20-202ENST00000330943 BZW2Q9Y6E2 419 aaKnown RBP15.72■□□□□ 0.11
SNX20-202ENST00000330943 TLDC2A0PJX2 215 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 PPIP5K2O43314 1243 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 LDHBP07195 334 aaKnown RBP15.72■□□□□ 0.11
SNX20-202ENST00000330943 GBP2P32456 591 aaPredicted RBP15.72■□□□□ 0.11
SNX20-202ENST00000330943 EIF3BP55884 814 aaKnown RBP15.72■□□□□ 0.11
SNX20-202ENST00000330943 PRPF4BQ13523 1007 aaKnown RBP15.72■□□□□ 0.11
SNX20-202ENST00000330943 UBE2SQ16763 222 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 TBC1D9BQ66K14 1250 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 HOOK3Q86VS8 718 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 GPBP1Q86WP2 473 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms