RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 DDIT3P35638 169 aa16.58■□□□□ 0.24
PTPN21-201ENST00000328736 KCTD16Q68DU8 428 aa16.58■□□□□ 0.24
PTPN21-201ENST00000328736 DYNLL2Q96FJ2 89 aa16.58■□□□□ 0.24
PTPN21-201ENST00000328736 SPATA31E1Q6ZUB1 1445 aa16.58■□□□□ 0.24
PTPN21-201ENST00000328736 EEF1B2P24534 225 aaKnown RBP16.57■□□□□ 0.24
PTPN21-201ENST00000328736 RXRBP28702 533 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 ADD2P35612 726 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 LIG3P49916 1009 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 DPCR1Q3MIW9 517 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 KIAA1755Q5JYT7 1200 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 KRT80Q6KB66 452 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 ANGPTL8Q6UXH0 198 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 POLR3CQ9BUI4 534 aaPredicted RBP16.57■□□□□ 0.24
PTPN21-201ENST00000328736 SLITRK6Q9H5Y7 841 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 FGFR1OP2Q9NVK5 253 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
PTPN21-201ENST00000328736 USP17L3A6NCW0 530 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 USP17L4A6NCW7 530 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 BNIP3LO60238 219 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 ESRRBO95718 433 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 SCARA5Q6ZMJ2 495 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 USP17L1Q7RTZ2 530 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 NSUN7Q8NE18 718 aaKnown RBP16.57■□□□□ 0.24
PTPN21-201ENST00000328736 FAM167AQ96KS9 214 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 SUN2Q9UH99 717 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 HPCAL4Q9UM19 191 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 MMP1P03956 469 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 NPR1P16066 1061 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 FBXW4P57775 412 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 OCRLQ01968 901 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 OR6B3Q8NGW1 331 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 CALR3Q96L12 384 aaKnown RBP16.57■□□□□ 0.24
PTPN21-201ENST00000328736 PNMA6FA0A0J9YX94 578 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 SRGAP2CP0DJJ0 459 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 CIAPIN1Q6FI81 312 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 AIFM3Q96NN9 605 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 KLC2Q9H0B6 622 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 PCDHA5Q9Y5H7 936 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 TSPOAP1O95153 1857 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 STK25O00506 426 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 PRPF3O43395 683 aaKnown RBP16.57■□□□□ 0.24
PTPN21-201ENST00000328736 TRMT2AQ8IZ69 625 aaKnown RBP16.57■□□□□ 0.24
PTPN21-201ENST00000328736 HSPH1Q92598 858 aa16.57■□□□□ 0.24
PTPN21-201ENST00000328736 N4BP2L2Q92802 583 aaPredicted RBP16.57■□□□□ 0.24
PTPN21-201ENST00000328736 SAMD9LQ8IVG5 1584 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 SNX2O60749 519 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 ZMYND10O75800 440 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 NR5A1Q13285 461 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 KIF19Q2TAC6 998 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 HACD3Q9P035 362 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 MOSPD1Q9UJG1 213 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 DPYSL4O14531 572 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 PSMA2P25787 234 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 EIF3BP55884 814 aaKnown RBP16.56■□□□□ 0.24
PTPN21-201ENST00000328736 SIRT2Q8IXJ6 389 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 URGCPQ8TCY9 931 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 PYROXD1Q8WU10 500 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 MAN1B1Q9UKM7 699 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 ZKSCAN8Q15776 578 aaPredicted RBP16.56■□□□□ 0.24
PTPN21-201ENST00000328736 SCG3Q8WXD2 468 aaKnown RBP16.56■□□□□ 0.24
PTPN21-201ENST00000328736 IFT43Q96FT9 208 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 K7ERI5 159 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 MOCS3O95396 460 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 EEPD1Q7L9B9 569 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 CATSPER4Q7RTX7 472 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 PDIK1LQ8N165 341 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 TJP3O95049 919 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 SLFN14P0C7P3 912 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 CCT5P48643 541 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 DHX9Q08211 1270 aaKnown RBP16.56■□□□□ 0.24
PTPN21-201ENST00000328736 COA7Q96BR5 231 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 FAF2Q96CS3 445 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 PPP1R16BQ96T49 567 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 TRAIPQ9BWF2 469 aa16.56■□□□□ 0.24
PTPN21-201ENST00000328736 EEF1DP29692 281 aaKnown RBP16.55■□□□□ 0.24
PTPN21-201ENST00000328736 TSPY1Q01534 308 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 DR1Q01658 176 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 C2orf54Q08AI8 447 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 PTK2BQ14289 1009 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 LLGL1Q15334 1064 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 ZBTB41Q5SVQ8 909 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 NEUROG2Q9H2A3 272 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 STAP2Q9UGK3 403 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 LRRC63Q05C16 580 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 NLRP4Q96MN2 994 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 IFT88Q13099 833 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 BBS9Q3SYG4 887 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 ZNF667Q5HYK9 610 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 FOXP4Q8IVH2 680 aaPredicted RBP16.55■□□□□ 0.24
PTPN21-201ENST00000328736 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 MTRQ99707 1265 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 NHEJ1Q9H9Q4 299 aaPredicted RBP16.55■□□□□ 0.24
PTPN21-201ENST00000328736 USP17L8P0C7I0 530 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 RNF207Q6ZRF8 634 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 TTC30AQ86WT1 665 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 PCDHA13Q9Y5I0 950 aa16.55■□□□□ 0.24
PTPN21-201ENST00000328736 HSPA4LO95757 839 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms