RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 INO80BQ9C086 356 aaPredicted RBP11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 CRB1P82279 1406 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 POTEMA6NI47 508 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 SFI1A8K8P3 1242 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 FGGP02679 453 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 MT-ND3P03897 115 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 S100BP04271 92 aaPredicted RBP11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 DEPDC1BQ8WUY9 529 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 TUBB6Q9BUF5 446 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 MSTO1Q9BUK6 570 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 BHMT2Q9H2M3 363 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 GOLGA8CPA6NN73 597 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 SCINQ9Y6U3 715 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 TNS3Q68CZ2 1445 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 SFR1Q86XK3 245 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 CCDC68Q9H2F9 335 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 VCX3AQ9NNX9 186 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 ANO9A1A5B4 782 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 CD58P19256 250 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 CC2D1AQ6P1N0 951 aaPredicted RBP11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 RAB44Q7Z6P3 723 aaPredicted RBP11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 HDAC11Q96DB2 347 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 KIF2CQ99661 725 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 EXOC1LA0A1B0GW35 172 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 PVALEFA0A1B0GWK0 134 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 CCDC188H7C350 402 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 OR6B2Q6IFH4 312 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 MIGA2Q7L4E1 593 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 METTL23Q86XA0 190 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 SMYD2Q9NRG4 433 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 MROH7-TTC4A0A0A0MT08 1334 aa11.76□□□□□ -0.53
SNRNP200-201ENST00000323853 PRPSAP2O60256 369 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 NR3C1P04150 777 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 BANK1Q8NDB2 785 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 GRID2IPA4D2P6 1211 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 CRKP46108 304 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 SH3BGRP55822 239 aaPredicted RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 CCNA1P78396 465 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 SHC4Q6S5L8 630 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 GCKP35557 465 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 ARL4AP40617 200 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 MYO1EQ12965 1108 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 JADE1Q6IE81 842 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 SLFN12LQ6IEE8 588 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 BARHL2Q9NY43 387 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 GBP7Q8N8V2 638 aaPredicted RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 HEXIM2Q96MH2 286 aaKnown RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 ISCA1Q9BUE6 129 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 NXF1Q9UBU9 619 aaKnown RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 ADAMTS1Q9UHI8 967 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 AXIN2Q9Y2T1 843 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 DLC1Q96QB1 1528 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 PIGOQ8TEQ8 1089 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 CACYBPQ9HB71 228 aaKnown RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 IQSEC2Q5JU85 1478 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 USP31Q70CQ4 1352 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 ZC3H13Q5T200 1668 aaKnown RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 E9PMD0 336 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 PODXLO00592 558 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 PEX3P56589 373 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 DPP9Q86TI2 863 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 CCNYQ8ND76 341 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 HSPH1Q92598 858 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 DCP1AQ9NPI6 582 aaPredicted RBP11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 UTYO14607 1347 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 SYNGAP1Q96PV0 1343 aa11.75□□□□□ -0.53
SNRNP200-201ENST00000323853 LRRD1A4D1F6 860 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 PDLIM2Q96JY6 352 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 RPF1Q9H9Y2 349 aaKnown RBP11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 RPS6KA4O75676 772 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 ANKRD20A4Q4UJ75 823 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 ANKRD20A8PQ5CZ79 823 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 ANKRD20A2Q5SQ80 823 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 ANKRD20A1Q5TYW2 823 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 DPY19L2Q6NUT2 758 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 CENPUQ71F23 418 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 MASTLQ96GX5 879 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 CALN1Q9BXU9 219 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 LCMT1Q9UIC8 334 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 FEM1BQ9UK73 627 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 LMTK2Q8IWU2 1503 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 FRMD3A2A2Y4 597 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 GSG1L2A8MUP6 293 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 CYP19A1P11511 503 aaPredicted RBP11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 SYNE4Q8N205 404 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 IQANK1A0A1B0GTG1 560 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 ZNF233A6NK53 670 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 EIF2AK2P19525 551 aaKnown RBP11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 PRDX5P30044 214 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 GGCXP38435 758 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 MYCBPQ99417 103 aaPredicted RBP11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 MXD3Q9BW11 206 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms