RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 AGXT2Q9BYV1 514 aa14.06□□□□□ -0.16
TPM3-204ENST00000323144 LMCD1Q9NZU5 365 aa14.06□□□□□ -0.16
TPM3-204ENST00000323144 VPS54Q9P1Q0 977 aa14.06□□□□□ -0.16
TPM3-204ENST00000323144 IGSF9BQ9UPX0 1349 aa14.06□□□□□ -0.16
TPM3-204ENST00000323144 POTEB3A0JP26 581 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 ZBTB42B2RXF5 422 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 BACH1O14867 736 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 MAFGO15525 162 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 DHX15O43143 795 aaKnown RBP14.05□□□□□ -0.16
TPM3-204ENST00000323144 ATG7O95352 703 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 KCNA5P22460 613 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 ZNF76P36508 570 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 GATMP50440 423 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 STAT5BP51692 787 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 GPM6BQ13491 265 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 TOB2Q14106 344 aaPredicted RBP14.05□□□□□ -0.16
TPM3-204ENST00000323144 TMEM266Q2M3C6 531 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 TIGD5Q53EQ6 642 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 POTEBQ6S5H4 581 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 MTHFD1LQ6UB35 978 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 ABHD15Q6UXT9 468 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 KHSRPQ92945 711 aaKnown RBP eCLIP14.05□□□□□ -0.16
TPM3-204ENST00000323144 LENG9Q96B70 501 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 SAMD11Q96NU1 681 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 SLC26A6Q9BXS9 759 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 ZMYND12Q9H0C1 365 aa14.05□□□□□ -0.16
TPM3-204ENST00000323144 RRN3P2A6NIE6 340 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 H3BNC9 293 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 IPO5O00410 1097 aaKnown RBP14.04□□□□□ -0.16
TPM3-204ENST00000323144 ATP4AP20648 1035 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 IBSPP21815 317 aaPredicted RBP14.04□□□□□ -0.16
TPM3-204ENST00000323144 CCT2P78371 535 aaKnown RBP14.04□□□□□ -0.16
TPM3-204ENST00000323144 SETQ01105 290 aaPredicted RBP14.04□□□□□ -0.16
TPM3-204ENST00000323144 PAK2Q13177 524 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 PAN2Q504Q3 1202 aaKnown RBP14.04□□□□□ -0.16
TPM3-204ENST00000323144 TCEAL5Q5H9L2 206 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 PLPPR4Q7Z2D5 763 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 TEX2Q8IWB9 1127 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 FIBCD1Q8N539 461 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 ATP8B4Q8TF62 1192 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 TMEM40Q8WWA1 233 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 TMX1Q9H3N1 280 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 PCDHA2Q9Y5H9 948 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 MRPL42Q9Y6G3 142 aaKnown RBP14.04□□□□□ -0.16
TPM3-204ENST00000323144 COL1A2P08123 1366 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 NCOR1O75376 2440 aa14.04□□□□□ -0.16
TPM3-204ENST00000323144 CCDC196A0A1B0GTZ2 297 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 SMIM35A0A1B0GVV1 85 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 M0QZ92 97 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 GRM6O15303 877 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 PRPF3O43395 683 aaKnown RBP14.03□□□□□ -0.16
TPM3-204ENST00000323144 EDIL3O43854 480 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 MGEA5O60502 916 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 C22orf31O95567 290 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 CYP3A4P08684 503 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 IL9P15248 144 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 PRR16Q569H4 304 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 FAM160B1Q5W0V3 765 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 RTN4RL1Q86UN2 441 aaPredicted RBP14.03□□□□□ -0.16
TPM3-204ENST00000323144 ZNF689Q96CS4 500 aaPredicted RBP14.03□□□□□ -0.16
TPM3-204ENST00000323144 IL17RAQ96F46 866 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 LARP6Q9BRS8 491 aaKnown RBP14.03□□□□□ -0.16
TPM3-204ENST00000323144 ZNF577Q9BSK1 485 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 RNF26Q9BY78 433 aaPredicted RBP14.03□□□□□ -0.16
TPM3-204ENST00000323144 UPF3BQ9BZI7 483 aaKnown RBP14.03□□□□□ -0.16
TPM3-204ENST00000323144 GLT8D2Q9H1C3 349 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 C6orf50Q9HD87 102 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 CD320Q9NPF0 282 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 ZNF302Q9NR11 478 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 HCSTQ9UBK5 93 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 PADI3Q9ULW8 664 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 GINS2Q9Y248 185 aa14.03□□□□□ -0.16
TPM3-204ENST00000323144 KDM3AQ9Y4C1 1321 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 C5orf67F2Z3F1 127 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 H3BQ06 376 aaPredicted RBP14.02□□□□□ -0.17
TPM3-204ENST00000323144 ENPP3O14638 875 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 DTNBO60941 627 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 DGKIO75912 1065 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 REC8O95072 547 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 PDIA3P30101 505 aaKnown RBP14.02□□□□□ -0.17
TPM3-204ENST00000323144 KRT76Q01546 638 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 BTG3Q14201 252 aaPredicted RBP14.02□□□□□ -0.17
TPM3-204ENST00000323144 UGCGQ16739 394 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 PTPROQ16827 1216 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 IER5Q5VY09 327 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 TRMT1LQ7Z2T5 733 aaKnown RBP14.02□□□□□ -0.17
TPM3-204ENST00000323144 CRIPAKQ8N1N5 446 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 FBXL16Q8N461 479 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 BANK1Q8NDB2 785 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 CCDC148Q8NFR7 591 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 CCDC12Q8WUD4 166 aaPredicted RBP14.02□□□□□ -0.17
TPM3-204ENST00000323144 GJA10Q969M2 543 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 CELF4Q9BZC1 486 aaKnown RBP14.02□□□□□ -0.17
TPM3-204ENST00000323144 NSUN3Q9H649 340 aaKnown RBP14.02□□□□□ -0.17
TPM3-204ENST00000323144 CDHR5Q9HBB8 845 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 ERVK-5Q9HDB9 667 aa14.02□□□□□ -0.17
TPM3-204ENST00000323144 C5orf42Q9H799 3197 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.01□□□□□ -0.17
TPM3-204ENST00000323144 CHMP2AO43633 222 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms