RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 RGL1Q9NZL6 768 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 KCNJ18B7U540 433 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 PSMA7O14818 248 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 ERLIN1O75477 346 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 ERLIN2O94905 339 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 CELF2O95319 508 aaKnown RBP14.4□□□□□ -0.1
CPNE1-201ENST00000317677 DSG3P32926 999 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 RPS6P62753 249 aaKnown RBP14.4□□□□□ -0.1
CPNE1-201ENST00000317677 MRPS9P82933 396 aaKnown RBP14.4□□□□□ -0.1
CPNE1-201ENST00000317677 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
CPNE1-201ENST00000317677 CYP4A11Q02928 519 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 COASYQ13057 564 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 KCNJ12Q14500 433 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 C11orf91Q3C1V1 193 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 MSANTD4Q8NCY6 345 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 EIF2AK1Q9BQI3 630 aaKnown RBP14.4□□□□□ -0.1
CPNE1-201ENST00000317677 MXRA8Q9BRK3 442 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 TAB2Q9NYJ8 693 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 ZNF214Q9UL59 606 aaPredicted RBP14.4□□□□□ -0.1
CPNE1-201ENST00000317677 A0A0G2JMZ2 1700 aa14.4□□□□□ -0.1
CPNE1-201ENST00000317677 C19orf81C9J6K1 198 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 ZBED4O75132 1171 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 SSBP05455 408 aaKnown RBP eCLIP14.39□□□□□ -0.11
CPNE1-201ENST00000317677 IDEP14735 1019 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 MNAT1P51948 309 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 COPB1P53618 953 aaKnown RBP14.39□□□□□ -0.11
CPNE1-201ENST00000317677 PPP2R5CQ13362 524 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 TUBB2AQ13885 445 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 LRCH2Q5VUJ6 765 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 HAUS3Q68CZ6 603 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 SPECC1LQ69YQ0 1117 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 CATSPERGQ6ZRH7 1159 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 KRT26Q7Z3Y9 468 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 GPBP1Q86WP2 473 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 TMEM139Q8IV31 216 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 MICALL1Q8N3F8 863 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 CCDC47Q96A33 483 aaKnown RBP14.39□□□□□ -0.11
CPNE1-201ENST00000317677 HSD17B14Q9BPX1 270 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 POLR3CQ9BUI4 534 aaPredicted RBP14.39□□□□□ -0.11
CPNE1-201ENST00000317677 TUBB2BQ9BVA1 445 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 EPC1Q9H2F5 836 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 EHMT1Q9H9B1 1298 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 PCDHA2Q9Y5H9 948 aa14.39□□□□□ -0.11
CPNE1-201ENST00000317677 FRMD3A2A2Y4 597 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 VEGFBP49765 207 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 STIM1Q13586 685 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 TMEM132BQ14DG7 1078 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 LRRC41Q15345 812 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 SH3D19Q5HYK7 790 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 CST9Q5W186 159 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 CENPPQ6IPU0 288 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 MCF2L2Q86YR7 1114 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 SULF1Q8IWU6 871 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 TC2NQ8N9U0 490 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 EEF2KMTQ96G04 330 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 TRIM47Q96LD4 638 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 VPS16Q9H269 839 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 UNC45AQ9H3U1 944 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 BCAS3Q9H6U6 928 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 WRAP73Q9P2S5 460 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-201ENST00000317677 FAN1Q9Y2M0 1017 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 UBIAD1Q9Y5Z9 338 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 CHMP2AO43633 222 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 MAP2K1Q02750 393 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-201ENST00000317677 PABPC4Q13310 644 aaKnown RBP eCLIP14.38□□□□□ -0.114e-7■■■□□ 15.8
CPNE1-201ENST00000317677 CTTNQ14247 550 aaKnown RBP14.38□□□□□ -0.11
CPNE1-201ENST00000317677 SYT2Q8N9I0 419 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-201ENST00000317677 ERMNQ8TAM6 284 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 DYDC2Q96IM9 177 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 WDR11Q9BZH6 1224 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 LRRC27Q9C0I9 530 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 ACBD3Q9H3P7 528 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 THAP9Q9H5L6 903 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 ZNF408Q9H9D4 720 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 RNF146Q9NTX7 359 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 PANK4Q9NVE7 773 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 TLL2Q9Y6L7 1015 aa14.38□□□□□ -0.11
CPNE1-201ENST00000317677 SPDYE16A6NNV3 312 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-201ENST00000317677 ZBTB39O15060 712 aa14.37□□□□□ -0.11
CPNE1-201ENST00000317677 DHX15O43143 795 aaKnown RBP14.37□□□□□ -0.11
CPNE1-201ENST00000317677 SLITRK3O94933 977 aa14.37□□□□□ -0.11
CPNE1-201ENST00000317677 HSPA1AP0DMV8 641 aaKnown RBP14.37□□□□□ -0.11
CPNE1-201ENST00000317677 HSPA1BP0DMV9 641 aaKnown RBP14.37□□□□□ -0.11
CPNE1-201ENST00000317677 FDX1P10109 184 aa14.37□□□□□ -0.11
CPNE1-201ENST00000317677 ERCC3P19447 782 aa14.37□□□□□ -0.11
CPNE1-201ENST00000317677 EIF2AK2P19525 551 aaKnown RBP14.37□□□□□ -0.11
CPNE1-201ENST00000317677 PCNX4Q63HM2 1172 aa14.37□□□□□ -0.11
CPNE1-201ENST00000317677 MOB2Q70IA6 237 aa14.37□□□□□ -0.11
CPNE1-201ENST00000317677 GUF1Q8N442 669 aaKnown RBP14.37□□□□□ -0.11
CPNE1-201ENST00000317677 CTAGE1Q96RT6 745 aa14.37□□□□□ -0.11
CPNE1-201ENST00000317677 ZNF577Q9BSK1 485 aa14.37□□□□□ -0.11
CPNE1-201ENST00000317677 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
CPNE1-201ENST00000317677 PEX10O60683 326 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 GAS7O60861 476 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 BCRP11274 1271 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 SETQ01105 290 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-201ENST00000317677 SPAG1Q07617 926 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 ITGB3BPQ13352 177 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-201ENST00000317677 GIT2Q14161 759 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 COG2Q14746 738 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms