RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 RPL13P26373 211 aaKnown RBP20.99■□□□□ 0.95
CD55-201ENST00000314754 EPS15P42566 896 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 CLCN6P51797 869 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 KIF11P52732 1056 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 USP14P54578 494 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 CYP27A1Q02318 531 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 WHAMMP3Q1A5X7 153 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 DCAF15Q66K64 600 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 CCDC125Q86Z20 511 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 PURBQ96QR8 312 aaKnown RBP20.99■□□□□ 0.95
CD55-201ENST00000314754 LXNQ9BS40 222 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 EPC1Q9H2F5 836 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 DEF6Q9H4E7 631 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 PARVGQ9HBI0 331 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 RAVER2Q9HCJ3 691 aaKnown RBP20.99■□□□□ 0.95
CD55-201ENST00000314754 CD2APQ9Y5K6 639 aa20.99■□□□□ 0.95
CD55-201ENST00000314754 COL11A1P12107 1806 aaPredicted RBP20.99■□□□□ 0.95
CD55-201ENST00000314754 EIF4A3P38919 411 aaKnown RBP20.98■□□□□ 0.95
CD55-201ENST00000314754 KCNH2Q12809 1159 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 KIF5AQ12840 1032 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 NBPF12Q5TAG4 269 aaPredicted RBP20.98■□□□□ 0.95
CD55-201ENST00000314754 PCNX4Q63HM2 1172 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 LSM14BQ9BX40 385 aaKnown RBP20.98■□□□□ 0.95
CD55-201ENST00000314754 IFIH1Q9BYX4 1025 aaKnown RBP20.98■□□□□ 0.95
CD55-201ENST00000314754 HOMER2Q9NSB8 354 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 OGFRQ9NZT2 677 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 ODF2LQ9ULJ1 636 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 SSU72P8A0A1W2PR75 194 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 SFI1A8K8P3 1242 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 NR3C1P04150 777 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 ZNF131P52739 623 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 TUBB4BP68371 445 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 MYCT1Q8N699 235 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 MYO6Q9UM54 1294 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 FZD1Q9UP38 647 aa20.98■□□□□ 0.95
CD55-201ENST00000314754 SLC16A3O15427 465 aaKnown RBP20.97■□□□□ 0.95
CD55-201ENST00000314754 APBA1Q02410 837 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 MAPK8IP2Q13387 824 aaPredicted RBP20.97■□□□□ 0.95
CD55-201ENST00000314754 MUM1L1Q5H9M0 696 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 SYTL5Q8TDW5 730 aaPredicted RBP20.97■□□□□ 0.95
CD55-201ENST00000314754 CRACR2AQ9BSW2 395 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 RPAP3Q9H6T3 665 aaPredicted RBP20.97■□□□□ 0.95
CD55-201ENST00000314754 ZNF446Q9NWS9 450 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 PKD2L1Q9P0L9 805 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 UBIAD1Q9Y5Z9 338 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 AKR1B10O60218 316 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 FDX1P10109 184 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 KCNA1Q09470 495 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 TKFCQ3LXA3 575 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 METTL14Q9HCE5 456 aaKnown RBP20.97■□□□□ 0.95
CD55-201ENST00000314754 NLRC4Q9NPP4 1024 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 PCDHA13Q9Y5I0 950 aa20.97■□□□□ 0.95
CD55-201ENST00000314754 SPDYE4A6NLX3 237 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 DDX39AO00148 427 aaKnown RBP20.96■□□□□ 0.95
CD55-201ENST00000314754 USO1O60763 962 aaKnown RBP20.96■□□□□ 0.95
CD55-201ENST00000314754 AKAP3O75969 853 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 XRCC5P13010 732 aaKnown RBP20.96■□□□□ 0.95
CD55-201ENST00000314754 POLR2FP61218 127 aaKnown RBP20.96■□□□□ 0.95
CD55-201ENST00000314754 PRAMEF18Q5VWM3 479 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 IKZF4Q9H2S9 585 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 PUF60Q9UHX1 559 aaKnown RBP20.96■□□□□ 0.95
CD55-201ENST00000314754 UBE4BO95155 1302 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 DHX15O43143 795 aaKnown RBP20.96■□□□□ 0.95
CD55-201ENST00000314754 ZBED4O75132 1171 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 EPB41P11171 864 aaKnown RBP20.96■□□□□ 0.95
CD55-201ENST00000314754 GUCY2CP25092 1073 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 SPP2Q13103 211 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 ASTE1Q2TB18 679 aaPredicted RBP20.96■□□□□ 0.95
CD55-201ENST00000314754 SFMBT2Q5VUG0 894 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 HGSNATQ68CP4 663 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 TRAPPC11Q7Z392 1133 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 MIER3Q7Z3K6 550 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 SCYL3Q8IZE3 742 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 BANK1Q8NDB2 785 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 ZSWIM4Q9H7M6 989 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 JADE2Q9NQC1 790 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 ZNF112Q9UJU3 913 aa20.96■□□□□ 0.95
CD55-201ENST00000314754 CTDP1Q9Y5B0 961 aaPredicted RBP20.96■□□□□ 0.95
CD55-201ENST00000314754 RLFQ13129 1914 aa20.95■□□□□ 0.95
CD55-201ENST00000314754 ZNF541Q9H0D2 1346 aa20.95■□□□□ 0.94
CD55-201ENST00000314754 ZMYM2Q9UBW7 1377 aa20.95■□□□□ 0.94
CD55-201ENST00000314754 TGFB1I1O43294 461 aa20.95■□□□□ 0.94
CD55-201ENST00000314754 AFPP02771 609 aaKnown RBP20.95■□□□□ 0.94
CD55-201ENST00000314754 RPS6P62753 249 aaKnown RBP20.95■□□□□ 0.94
CD55-201ENST00000314754 MRPS9P82933 396 aaKnown RBP20.95■□□□□ 0.94
CD55-201ENST00000314754 NFIL3Q16649 462 aa20.95■□□□□ 0.94
CD55-201ENST00000314754 PAPD7Q5XG87 772 aaKnown RBP20.95■□□□□ 0.94
CD55-201ENST00000314754 STXBP4Q6ZWJ1 553 aa20.95■□□□□ 0.94
CD55-201ENST00000314754 WNK4Q96J92 1243 aa20.95■□□□□ 0.94
CD55-201ENST00000314754 FIZ1Q96SL8 496 aa20.95■□□□□ 0.94
CD55-201ENST00000314754 AGO4Q9HCK5 861 aaKnown RBP20.95■□□□□ 0.94
CD55-201ENST00000314754 DUSP10Q9Y6W6 482 aa20.95■□□□□ 0.94
CD55-201ENST00000314754 ANO9A1A5B4 782 aa20.94■□□□□ 0.94
CD55-201ENST00000314754 ARHGEF35A5YM69 484 aa20.94■□□□□ 0.94
CD55-201ENST00000314754 ZSCAN20P17040 1043 aaPredicted RBP20.94■□□□□ 0.94
CD55-201ENST00000314754 NMT1P30419 496 aaKnown RBP20.94■□□□□ 0.94
CD55-201ENST00000314754 BACE1P56817 501 aa20.94■□□□□ 0.94
CD55-201ENST00000314754 SLC9C1Q4G0N8 1177 aa20.94■□□□□ 0.94
CD55-201ENST00000314754 SECISBP2LQ93073 1101 aaKnown RBP20.94■□□□□ 0.94
CD55-201ENST00000314754 SGIP1Q9BQI5 828 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms