RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TPCN2Q8NHX9 752 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 MYCBPQ99417 103 aaPredicted RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 TACO1Q9BSH4 297 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 VCPKMTQ9H867 229 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 JMJD4Q9H9V9 463 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 GPCPD1Q9NPB8 672 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 NOC2LQ9Y3T9 749 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 GAKO14976 1311 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 TMCO5BA8MYB1 307 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 E9PMD0 336 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 PDXKO00764 312 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 KCNQ2O43526 872 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 CHRM1P11229 460 aaPredicted RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 IL1R1P14778 569 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 FERP16591 822 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 ATP2B4P23634 1241 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 HPDP32754 393 aaPredicted RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 EIF3BP55884 814 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 RHBDL3P58872 404 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 ACTN3Q08043 901 aaPredicted RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 UBE2SQ16763 222 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 ODF2Q5BJF6 829 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 SLFN11Q7Z7L1 901 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 CENPHQ9H3R5 247 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 CNOT10Q9H9A5 744 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 CD209Q9NNX6 404 aa15.12■□□□□ 0.01
MKS1-201ENST00000313863 SRP68Q9UHB9 627 aaKnown RBP15.12■□□□□ 0.01
MKS1-201ENST00000313863 IGKV6D-41A0A0C4DH26 115 aa15.11■□□□□ 0.01
MKS1-201ENST00000313863 GTPBP10A4D1E9 387 aaKnown RBP15.11■□□□□ 0.01
MKS1-201ENST00000313863 H0YGN5 161 aa15.11■□□□□ 0.01
MKS1-201ENST00000313863 ZBTB5O15062 677 aa15.11■□□□□ 0.01
MKS1-201ENST00000313863 SMTNP53814 917 aa15.11■□□□□ 0.01
MKS1-201ENST00000313863 PPP2R2AP63151 447 aa15.11■□□□□ 0.01
MKS1-201ENST00000313863 KNOP1Q1ED39 458 aaKnown RBP15.11■□□□□ 0.01
MKS1-201ENST00000313863 KCNV1Q6PIU1 500 aa15.11■□□□□ 0.01
MKS1-201ENST00000313863 TAX1BP1Q86VP1 789 aa15.11■□□□□ 0.01
MKS1-201ENST00000313863 CYFIP2Q96F07 1278 aa15.11■□□□□ 0.01
MKS1-201ENST00000313863 NAP1L3Q99457 506 aaPredicted RBP15.11■□□□□ 0.01
MKS1-201ENST00000313863 DHX36Q9H2U1 1008 aaKnown RBP15.11■□□□□ 0.01
MKS1-201ENST00000313863 UTP11Q9Y3A2 253 aaKnown RBP15.11■□□□□ 0.01
MKS1-201ENST00000313863 NFS1Q9Y697 457 aa15.11■□□□□ 0.01
MKS1-201ENST00000313863 PAEPP09466 180 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 ECHS1P30084 290 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 HDLBPQ00341 1268 aaKnown RBP15.1■□□□□ 0.01
MKS1-201ENST00000313863 ZNF844Q08AG5 666 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 LRRC47Q8N1G4 583 aaKnown RBP15.1■□□□□ 0.01
MKS1-201ENST00000313863 RAB17Q9H0T7 212 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 TTC7AQ9ULT0 858 aaPredicted RBP15.1■□□□□ 0.01
MKS1-201ENST00000313863 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
MKS1-201ENST00000313863 CYP3A7-CYP3A51PA0A087WV96 503 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 POTEB3A0JP26 581 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 POTECB2RU33 542 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 TRAPPC3O43617 180 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 CYP3A7P24462 503 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 PON1P27169 355 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 SLC12A3P55017 1021 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 IFT88Q13099 833 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 POTEBQ6S5H4 581 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 C6orf89Q6UWU4 347 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 CCDC50Q8IVM0 306 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 METTL13Q8N6R0 699 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 UBLCP1Q8WVY7 318 aaPredicted RBP15.1■□□□□ 0.01
MKS1-201ENST00000313863 SEC14L1Q92503 715 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 ZHX3Q9H4I2 956 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 KCNMB3Q9NPA1 279 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 PPANQ9NQ55 473 aaKnown RBP15.1■□□□□ 0.01
MKS1-201ENST00000313863 SLC12A6Q9UHW9 1150 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 NENFQ9UMX5 172 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 RTCBQ9Y3I0 505 aaKnown RBP15.1■□□□□ 0.01
MKS1-201ENST00000313863 DAAM1Q9Y4D1 1078 aa15.1■□□□□ 0.01
MKS1-201ENST00000313863 TBX3O15119 743 aa15.09■□□□□ 0.01
MKS1-201ENST00000313863 RDXP35241 583 aaKnown RBP15.09■□□□□ 0.01
MKS1-201ENST00000313863 SEC24CP53992 1094 aa15.09■□□□□ 0.01
MKS1-201ENST00000313863 UAP1Q16222 522 aaPredicted RBP15.09■□□□□ 0.01
MKS1-201ENST00000313863 KCTD17Q8N5Z5 321 aa15.09■□□□□ 0.01
MKS1-201ENST00000313863 FGFBP2Q9BYJ0 223 aa15.09■□□□□ 0.01
MKS1-201ENST00000313863 TYW1Q9NV66 732 aaKnown RBP15.09■□□□□ 0.01
MKS1-201ENST00000313863 AMFRQ9UKV5 643 aa15.09■□□□□ 0.01
MKS1-201ENST00000313863 DNM3Q9UQ16 869 aa15.09■□□□□ 0.01
MKS1-201ENST00000313863 STXBP5LQ9Y2K9 1186 aa15.09■□□□□ 0.01
MKS1-201ENST00000313863 GNPATO15228 680 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 PPP1R12BO60237 982 aaPredicted RBP15.08■□□□□ 0.01
MKS1-201ENST00000313863 UFL1O94874 794 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 CCDC172P0C7W6 258 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 SLC9A1P19634 815 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 LMNB1P20700 586 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 GABPAQ06546 454 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 AP3B2Q13367 1082 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 EPHA7Q15375 998 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 TRADDQ15628 312 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 BMT2Q1RMZ1 405 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 MFSD14BQ5SR56 506 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 DPY19L2P1Q6NXN4 242 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 DPP8Q6V1X1 898 aaPredicted RBP15.08■□□□□ 0.01
MKS1-201ENST00000313863 EPM2AIP1Q7L775 607 aaPredicted RBP15.08■□□□□ 0.01
MKS1-201ENST00000313863 DAAM2Q86T65 1068 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 HOOK3Q86VS8 718 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 TEX2Q8IWB9 1127 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 MBOAT7Q96N66 472 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 AP1M1Q9BXS5 423 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms