RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 MMTAG2Q9BU76 263 aaKnown RBP16.58■□□□□ 0.24
HCFC1-201ENST00000310441 UBE4BO95155 1302 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 SERPINB4P48594 390 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 TEX9Q8N6V9 391 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 AP5M1Q9H0R1 490 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 ZSWIM6Q9HCJ5 1215 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 SELENONQ9NZV5 590 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 JAK2O60674 1132 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 HOXC9P31274 260 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 MKRN3Q13064 507 aaKnown RBP16.58■□□□□ 0.24
HCFC1-201ENST00000310441 BLOC1S6Q9UL45 172 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 AP3B1O00203 1094 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 DEAF1O75398 565 aaPredicted RBP16.57■□□□□ 0.24
HCFC1-201ENST00000310441 TRADDQ15628 312 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 TDRD7Q8NHU6 1098 aaKnown RBP16.57■□□□□ 0.24
HCFC1-201ENST00000310441 MYL10Q9BUA6 226 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 USP40Q9NVE5 1235 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 MAPKBP1O60336 1514 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 MYH6P13533 1939 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 TMPRSS15P98073 1019 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 TMED8Q6PL24 325 aaPredicted RBP16.57■□□□□ 0.24
HCFC1-201ENST00000310441 RAB42Q8N4Z0 105 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 UBAP1LF5GYI3 381 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 DAB2P98082 770 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 C1orf146Q5VVC0 180 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 ERVV-2B6SEH9 535 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 KCTD2Q14681 263 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 TMEM259Q4ZIN3 620 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 CHUKO15111 745 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 S100A5P33763 92 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 RECQLP46063 649 aaPredicted RBP16.57■□□□□ 0.24
HCFC1-201ENST00000310441 ZBED6P86452 979 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 EFTUD2Q15029 972 aaKnown RBP eCLIP16.57■□□□□ 0.244e-7■■■■□ 20.4
HCFC1-201ENST00000310441 SLC35F6Q8N357 371 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 ZFP69BQ9UJL9 534 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 MECOMQ03112 1051 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 FBXO31Q5XUX0 539 aaPredicted RBP16.57■□□□□ 0.24
HCFC1-201ENST00000310441 IFNL3Q8IZI9 196 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 TBK1Q9UHD2 729 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
HCFC1-201ENST00000310441 ANKRD12Q6UB98 2062 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 ABCC2Q92887 1545 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 PRR23D1E9PI22 279 aaPredicted RBP16.56■□□□□ 0.24
HCFC1-201ENST00000310441 PRR23D2P0DMB1 279 aaPredicted RBP16.56■□□□□ 0.24
HCFC1-201ENST00000310441 ALAS1P13196 640 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 TBC1D9BQ66K14 1250 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 PROM2Q8N271 834 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 GDAP1Q8TB36 358 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 GRAMD1AQ96CP6 724 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 PRKAG2Q9UGJ0 569 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 PPARDQ03181 441 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 FAM149B1Q96BN6 582 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 NHEJ1Q9H9Q4 299 aaPredicted RBP16.56■□□□□ 0.24
HCFC1-201ENST00000310441 AP1B1Q10567 949 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 FBXO18Q8NFZ0 1043 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 CFLARO15519 480 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 ASAP2O43150 1006 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 PPIP5K2O43314 1243 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 KDM1AO60341 852 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 ABCB5Q2M3G0 1257 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 ELMOD1Q8N336 334 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 GCP02774 474 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 RWDD2BP57060 319 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 ZNF408Q9H9D4 720 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 INTUQ9ULD6 942 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 MRPS15P82914 257 aaKnown RBP16.56■□□□□ 0.24
HCFC1-201ENST00000310441 PI4K2BQ8TCG2 481 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 TRIM54Q9BYV2 358 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 SEL1LQ9UBV2 794 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 BRD2P25440 801 aaKnown RBP16.56■□□□□ 0.24
HCFC1-201ENST00000310441 ABHD8Q96I13 439 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 TMEM63CQ9P1W3 806 aa16.56■□□□□ 0.24
HCFC1-201ENST00000310441 ANP32DO95626 131 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 CARSP49589 748 aaKnown RBP16.55■□□□□ 0.24
HCFC1-201ENST00000310441 POLA2Q14181 598 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 TADA2BQ86TJ2 420 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 CACNA1FO60840 1977 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 GOLGA8RI6L899 631 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 ESRRBO95718 433 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 E2F5Q15329 346 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 PLEKHM3Q6ZWE6 761 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 TNIP2Q8NFZ5 429 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 MXD3Q9BW11 206 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 SUGT1Q9Y2Z0 365 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 LDHAP00338 332 aaKnown RBP16.55■□□□□ 0.24
HCFC1-201ENST00000310441 IL10P22301 178 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 SLC39A14Q15043 492 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 NDEL1Q9GZM8 345 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 CCDC22O60826 627 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 TRPC1P48995 793 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 DDX42Q86XP3 938 aaKnown RBP eCLIP16.55■□□□□ 0.24
HCFC1-201ENST00000310441 SEMA3FQ13275 785 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 DCPSQ96C86 337 aaKnown RBP16.55■□□□□ 0.24
HCFC1-201ENST00000310441 BTBD6Q96KE9 485 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 RRAGDQ9NQL2 400 aaPredicted RBP16.55■□□□□ 0.24
HCFC1-201ENST00000310441 SEPT3Q9UH03 358 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 TNKSO95271 1327 aa16.55■□□□□ 0.24
HCFC1-201ENST00000310441 LRRN2O75325 713 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms