RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 DEFB128Q7Z7B8 93 aa22.28■■□□□ 1.16
VEGFB-201ENST00000309422 RAB34Q9BZG1 259 aa22.28■■□□□ 1.16
VEGFB-201ENST00000309422 PRO3102Q9H379 93 aa22.28■■□□□ 1.16
VEGFB-201ENST00000309422 SEPT9Q9UHD8 586 aaPredicted RBP22.28■■□□□ 1.16
VEGFB-201ENST00000309422 RSPH10B2B2RC85 870 aa22.27■■□□□ 1.16
VEGFB-201ENST00000309422 OR52Z1P0C646 297 aa22.27■■□□□ 1.16
VEGFB-201ENST00000309422 RSPH10BP0C881 870 aa22.27■■□□□ 1.16
VEGFB-201ENST00000309422 TXKP42681 527 aa22.27■■□□□ 1.16
VEGFB-201ENST00000309422 PSMC5P62195 406 aa22.27■■□□□ 1.16
VEGFB-201ENST00000309422 ERMNQ8TAM6 284 aa22.27■■□□□ 1.16
VEGFB-201ENST00000309422 NEK9Q8TD19 979 aa22.27■■□□□ 1.16
VEGFB-201ENST00000309422 TTC12Q9H892 705 aaPredicted RBP22.27■■□□□ 1.16
VEGFB-201ENST00000309422 CEP290O15078 2479 aa22.26■■□□□ 1.15
VEGFB-201ENST00000309422 ZBBXA8MT70 800 aa22.26■■□□□ 1.15
VEGFB-201ENST00000309422 FGBP02675 491 aa22.26■■□□□ 1.15
VEGFB-201ENST00000309422 CTSHP09668 335 aa22.26■■□□□ 1.15
VEGFB-201ENST00000309422 ACRP10323 421 aa22.26■■□□□ 1.15
VEGFB-201ENST00000309422 TMOD1P28289 359 aa22.26■■□□□ 1.15
VEGFB-201ENST00000309422 ZNF174Q15697 407 aa22.26■■□□□ 1.15
VEGFB-201ENST00000309422 FAM49AQ9H0Q0 323 aaPredicted RBP22.26■■□□□ 1.15
VEGFB-201ENST00000309422 PCDH10Q9P2E7 1040 aa22.26■■□□□ 1.15
VEGFB-201ENST00000309422 VAV3Q9UKW4 847 aa22.26■■□□□ 1.15
VEGFB-201ENST00000309422 KIF28PB7ZC32 967 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 P4HBP07237 508 aaKnown RBP22.25■■□□□ 1.15
VEGFB-201ENST00000309422 QARSP47897 775 aaKnown RBP22.25■■□□□ 1.15
VEGFB-201ENST00000309422 EPHA7Q15375 998 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 XKR3Q5GH77 459 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 IER5Q5VY09 327 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 BRAPQ7Z569 592 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 DHX38Q92620 1227 aaKnown RBP22.25■■□□□ 1.15
VEGFB-201ENST00000309422 HAS1Q92839 578 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 MAP7D2Q96T17 732 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 FOXD4L1Q9NU39 408 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 MBLAC1A4D2B0 266 aaPredicted RBP22.25■■□□□ 1.15
VEGFB-201ENST00000309422 LAD1O00515 517 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 MAGEB2O15479 319 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 ZNF618Q5T7W0 954 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 METTL13Q8N6R0 699 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 BANK1Q8NDB2 785 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 JPH2Q9BR39 696 aaPredicted RBP22.25■■□□□ 1.15
VEGFB-201ENST00000309422 PCDHA2Q9Y5H9 948 aa22.25■■□□□ 1.15
VEGFB-201ENST00000309422 EFCAB14O75071 495 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 PDIA4P13667 645 aaKnown RBP22.24■■□□□ 1.15
VEGFB-201ENST00000309422 TBC1D8BQ0IIM8 1120 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 SHHQ15465 462 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 HAUS3Q68CZ6 603 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 MTHFD1LQ6UB35 978 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 OTUD6AQ7L8S5 288 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 EXOC8Q8IYI6 725 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 CTAGE1Q96RT6 745 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.24■■□□□ 1.154e-6■■■■□ 20.9
VEGFB-201ENST00000309422 LXNQ9BS40 222 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 ZSWIM4Q9H7M6 989 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 STK24Q9Y6E0 443 aa22.24■■□□□ 1.15
VEGFB-201ENST00000309422 SMIM35A0A1B0GVV1 85 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 BAIAP3O94812 1187 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 KCNJ6P48051 423 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 ADAM17P78536 824 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 HIC1Q14526 733 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 LRIT3Q3SXY7 679 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 C9orf50Q5SZB4 431 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 B3GNT9Q6UX72 402 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 ZNF365Q70YC5 407 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 RPAINQ86UA6 219 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 NME8Q8N427 588 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 TRAPPC12Q8WVT3 735 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 DNAJB3Q8WWF6 145 aa22.23■■□□□ 1.15
VEGFB-201ENST00000309422 DDX11L8A8MPP1 907 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 BMP15O95972 392 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 KLRC1P26715 233 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 BECN1Q14457 450 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 TRIM71Q2Q1W2 868 aaKnown RBP22.22■■□□□ 1.15
VEGFB-201ENST00000309422 TMEM240Q5SV17 173 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 CNKSR3Q6P9H4 555 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 OTOP2Q7RTS6 562 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 SEPT8Q92599 483 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 MTMR9Q96QG7 549 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 PPME1Q9Y570 386 aa22.22■■□□□ 1.15
VEGFB-201ENST00000309422 DNM2P50570 870 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 EPHB4P54760 987 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 MRPS6P82932 125 aaKnown RBP22.21■■□□□ 1.15
VEGFB-201ENST00000309422 CYP4A11Q02928 519 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 UGCGQ16739 394 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 MTERF2Q49AM1 385 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 RUFY4Q6ZNE9 571 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 ZNF710Q8N1W2 664 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 HERVK_113Q902F9 699 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 WNT8BQ93098 351 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 SCLT1Q96NL6 688 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 SLC4A7Q9Y6M7 1214 aa22.21■■□□□ 1.15
VEGFB-201ENST00000309422 TANC1Q9C0D5 1861 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 EML1O00423 815 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 TECP42680 631 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 ODR4Q5SWX8 454 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 MARCH8Q5T0T0 291 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 TPH2Q8IWU9 490 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 SLC7A3Q8WY07 619 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 APBB2Q92870 758 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 TMEM60Q9H2L4 133 aa22.2■■□□□ 1.14
VEGFB-201ENST00000309422 AKT3Q9Y243 479 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms