RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 NAALADL2Q58DX5 795 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 ERGIC2Q96RQ1 377 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 CAPS2Q9BXY5 557 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 CCSER1Q9C0I3 900 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 KBTBD4Q9NVX7 518 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 TFR2Q9UP52 801 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 BICDL2A1A5D9 508 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 POTEMA6NI47 508 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 B4DLN1 442 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 EBAG9O00559 213 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 ZNF185O15231 689 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 USO1O60763 962 aaKnown RBP11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 TACC1O75410 805 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 SKOR1P84550 965 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 C2orf54Q08AI8 447 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 CALCRLQ16602 461 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 BTNL9Q6UXG8 535 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 CPXCR1Q8N123 301 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 DUSP9Q99956 384 aaKnown RBP11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 CUEDC2Q9H467 287 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 PLEKHA4Q9H4M7 779 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 AGPAT5Q9NUQ2 364 aa11.33□□□□□ -0.59
APOBEC3F-201ENST00000308521 ARFGEF1Q9Y6D6 1849 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 PES1O00541 588 aaKnown RBP11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 EIF3HO15372 352 aaKnown RBP eCLIP11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 ZMYND10O75800 440 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 TRIM21P19474 475 aaKnown RBP11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 CCNE1P24864 410 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 RDXP35241 583 aaKnown RBP11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 TBC1D8BQ0IIM8 1120 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 NNTQ13423 1086 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 EMBQ6PCB8 327 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 KCNV1Q6PIU1 500 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 SLC30A10Q6XR72 485 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 AGBL1Q96MI9 1066 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 ANO3Q9BYT9 981 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 TANGO6Q9C0B7 1094 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 JADE2Q9NQC1 790 aa11.33□□□□□ -0.6
APOBEC3F-201ENST00000308521 MARCH6O60337 910 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 CTNND1O60716 968 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 LCA5LO95447 670 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 EPHB4P54760 987 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 BIRC2Q13490 618 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 SPA17Q15506 151 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 PREPLQ4J6C6 727 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 PPP1R18Q6NYC8 613 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 GSPT2Q8IYD1 628 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 CYP2W1Q8TAV3 490 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 CAVIN3Q969G5 261 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 DDX25Q9UHL0 483 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 ZHX2Q9Y6X8 837 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 ADM5C9JUS6 153 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 NEFHP12036 1026 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 TCP1P17987 556 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 SND1Q7KZF4 910 aaKnown RBP eCLIP11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 CSGALNACT2Q8N6G5 542 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 CHURC1Q8WUH1 139 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 KAT2BQ92831 832 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 P2RX5Q93086 422 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 FAM169AQ9Y6X4 670 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 GRIN2DO15399 1336 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 MYH7BA7E2Y1 1941 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 ANKRD65E5RJM6 399 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 LAD1O00515 517 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 NF2P35240 595 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 CCT5P48643 541 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 GLE1Q53GS7 698 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 CCDC155Q8N6L0 562 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 SPATA4Q8NEY3 305 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 HAS1Q92839 578 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 CCDC47Q96A33 483 aaKnown RBP11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 CCDC42Q96M95 316 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 GDAP1L1Q96MZ0 367 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 MTMR9Q96QG7 549 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 SH2D4AQ9H788 454 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 DUSP10Q9Y6W6 482 aa11.32□□□□□ -0.6
APOBEC3F-201ENST00000308521 MACROD2A1Z1Q3 448 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 SPDYE3A6NKU9 549 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 ZNF263O14978 683 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 FLOT1O75955 427 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 PRPHP41219 470 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 PRR16Q569H4 304 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 MIIPQ5JXC2 388 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 WLSQ5T9L3 541 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 CABP7Q86V35 215 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 WNK4Q96J92 1243 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 CNOT6LQ96LI5 555 aaKnown RBP11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 LRRC1Q9BTT6 524 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 LRWD1Q9UFC0 647 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 PLAGL2Q9UPG8 496 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 HYOU1Q9Y4L1 999 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 SBF1O95248 1867 aa11.31□□□□□ -0.6
APOBEC3F-201ENST00000308521 PLCG1P19174 1290 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms