RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 RAB20Q9NX57 234 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 MYMKA6NI61 221 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 PSMD14O00487 310 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 TBX3O15119 743 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 IFNB1P01574 187 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 CEP85LQ5SZL2 805 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 FBXO38Q6PIJ6 1188 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 EXOC8Q8IYI6 725 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 VCPKMTQ9H867 229 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 MED4Q9NPJ6 270 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 PGRMC1O00264 195 aaKnown RBP12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 VIMP08670 466 aaKnown RBP12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 KCNJ6P48051 423 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 MTF1Q14872 753 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 PKN1Q16512 942 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 GIMAP8Q8ND71 665 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 BAZ2BQ9UIF8 2168 aaKnown RBP12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 WTIPA6NIX2 430 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 ZNF233A6NK53 670 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 E7EVH7 732 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 SFNP31947 248 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 UAP1Q16222 522 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 CAPN11Q9UMQ6 739 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 RIC1Q4ADV7 1423 aa12.4□□□□□ -0.43
PCDHGC3-201ENST00000308177 HEXIM1O94992 359 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 VPS41P49754 854 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 PPARDQ03181 441 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 C2orf54Q08AI8 447 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 MRRFQ96E11 262 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 RABEP2Q9H5N1 569 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 SPC25Q9HBM1 224 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 FAM217BQ9NTX9 383 aaPredicted RBP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 HACE1Q8IYU2 909 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 CCDC63Q8NA47 563 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 MAGOHBQ96A72 148 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 ZDHHC15Q96MV8 337 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 AKT3Q9Y243 479 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 ATF7P17544 494 aaPredicted RBP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 TFAMQ00059 246 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 HADHQ16836 314 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 MICALL2Q8IY33 904 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 LPAR1Q92633 364 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 EPB41L5Q9HCM4 733 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 SLC16A4O15374 487 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 SREK1Q8WXA9 508 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 TRIM11Q96F44 468 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 PBKQ96KB5 322 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 TUFT1Q9NNX1 390 aa12.39□□□□□ -0.43
PCDHGC3-201ENST00000308177 WDR46O15213 610 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 DAPK3O43293 454 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 PSMC5P62195 406 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 ZBTB16Q05516 673 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 CCDC89Q8N998 374 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 GRK7Q8WTQ7 553 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 RNF34Q969K3 372 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 CNOT7Q9UIV1 285 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 FAM169AQ9Y6X4 670 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 STAM2O75886 525 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 MAPK4P31152 587 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 GCLMP48507 274 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 HMGCS2P54868 508 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 FAM47CQ5HY64 1035 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 B4GALNT4Q76KP1 1039 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 TAOK1Q7L7X3 1001 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 FAM71BQ8TC56 605 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 ATP6V0A4Q9HBG4 840 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 HESX1Q9UBX0 185 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 NPHP3-ACAD11A0A0J9YXS1 232 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 ANO9A1A5B4 782 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 EIF3CLB5ME19 914 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 THAP12O43422 761 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 SRGAP2CP0DJJ0 459 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 ADCY8P40145 1251 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 FXR1P51114 621 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 MTMR2Q13614 643 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 SLFN12LQ6IEE8 588 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 ANKRD36BP1Q96IX9 119 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 EIF3CQ99613 913 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 EDEM3Q9BZQ6 932 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 TMEM39BQ9GZU3 492 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 ACAD9Q9H845 621 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 PLCB1Q9NQ66 1216 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 GABBR1Q9UBS5 961 aa12.38□□□□□ -0.43
PCDHGC3-201ENST00000308177 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 PDXKO00764 312 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 DPEP1P16444 411 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 GFPT1Q06210 699 aaPredicted RBP12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 MICALL1Q8N3F8 863 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 TC2NQ8N9U0 490 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 MSTO1Q9BUK6 570 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 MIS12Q9H081 205 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 ITIH6Q6UXX5 1313 aa12.37□□□□□ -0.43
PCDHGC3-201ENST00000308177 MARK3P27448 753 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms