RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SNTNA6NMZ2 147 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 SLCO1B7G3V0H7 640 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 PIGHQ14442 188 aaPredicted RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 PRR23CQ6ZRP0 262 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 CD302Q8IX05 232 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 GIPC2Q8TF65 315 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 PACSIN2Q9UNF0 486 aaPredicted RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 ITGA6P23229 1130 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 LMBR1LQ6UX01 489 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 ZNF654Q8IZM8 581 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 RBM46Q8TBY0 533 aaKnown RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 CCDC8Q9H0W5 538 aaPredicted RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 LRWD1Q9UFC0 647 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 RNF187Q5TA31 235 aaPredicted RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 FOXD4L5Q5VV16 416 aaPredicted RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 SUGP1Q8IWZ8 645 aaKnown RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 FOXD4L4Q8WXT5 416 aaPredicted RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 DIABLOQ9NR28 239 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 E7EWF7 191 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 GCNT3O95395 438 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 ATP2B2Q01814 1243 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 SUPT20HL1Q3ZLR7 823 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 NT5DC4Q86YG4 428 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 EPSTI1Q96J88 318 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 CCSER1Q9C0I3 900 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 SERPINB13Q9UIV8 391 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 SLC16A3O15427 465 aaKnown RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 SERPINB3P29508 390 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 ACAP1Q15027 740 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 CICQ96RK0 1608 aaPredicted RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 FAM83GA6ND36 823 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 HSPA1AP0DMV8 641 aaKnown RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 HSPA1BP0DMV9 641 aaKnown RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 MX2P20592 715 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 SPARCL1Q14515 664 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 MXD4Q14582 209 aaPredicted RBP4.32□□□□□ -1.72
USH2A-201ENST00000307340 STAT4Q14765 748 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 FRMD5Q7Z6J6 570 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 PALM2Q8IXS6 379 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 DCAF4Q8WV16 495 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 IL17RAQ96F46 866 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 HESX1Q9UBX0 185 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 PPP2R2CQ9Y2T4 447 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 WDR93Q6P2C0 686 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 PPP1R14BQ96C90 147 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 USP44Q9H0E7 712 aa4.32□□□□□ -1.72
USH2A-201ENST00000307340 C16orf96A6NNT2 1141 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 MB21D1Q8N884 522 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 CCDC63Q8NA47 563 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 CLIC6Q96NY7 704 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 PRRG3Q9BZD7 231 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 PSTPIP2Q9H939 334 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 VPS18Q9P253 973 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 MSH5O43196 834 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 ATP1A3P13637 1013 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 ARL4AP40617 200 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 TPD52P55327 224 aaPredicted RBP4.31□□□□□ -1.72
USH2A-201ENST00000307340 MRPS35P82673 323 aaKnown RBP4.31□□□□□ -1.72
USH2A-201ENST00000307340 MORC3Q14149 939 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 MRPL48Q96GC5 212 aaKnown RBP4.31□□□□□ -1.72
USH2A-201ENST00000307340 CCDC138Q96M89 665 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 MFHAS1Q9Y4C4 1052 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 PPIP5K2O43314 1243 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 MAP3K7O43318 606 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 CRCPO75575 148 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 LRIG3Q6UXM1 1119 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 STARD8Q92502 1023 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 FBXL5Q9UKA1 691 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 PPP1R9AQ9ULJ8 1098 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 UTYO14607 1347 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 VWA3AA6NCI4 1184 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 GTF2H1P32780 548 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 NUGGCQ68CJ6 796 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 ZDHHC17Q8IUH5 632 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 CCT7Q99832 543 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 NRBP2Q9NSY0 501 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 ATP5J2-PTCD1G3V325 749 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 PTCD1O75127 700 aaKnown RBP4.31□□□□□ -1.72
USH2A-201ENST00000307340 TNNC2P02585 160 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 SLC26A2P50443 739 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 EIF6P56537 245 aaKnown RBP4.31□□□□□ -1.72
USH2A-201ENST00000307340 PPARAQ07869 468 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 CTAGE3PQ8IX95 158 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 RTKN2Q8IZC4 609 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 H0YIN7 160 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 KRIT1O00522 736 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 TM9SF1O15321 606 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 KATNA1O75449 491 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 KRT4P19013 534 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 DPY19L2Q6NUT2 758 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 DIS3L2Q8IYB7 885 aaKnown RBP4.31□□□□□ -1.72
USH2A-201ENST00000307340 HEG1Q9ULI3 1381 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 A6NJR5 290 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 GAS7O60861 476 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 KCNA4P22459 653 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 EPS8Q12929 822 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 POLA2Q14181 598 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 HHATQ5VTY9 493 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 ZFP1Q6P2D0 407 aa4.31□□□□□ -1.72
USH2A-201ENST00000307340 NANOGNBQ7Z5D8 188 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms