RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 HOXA13P31271 388 aaPredicted RBP15.94■□□□□ 0.14
PTPN9-201ENST00000306726 GTF2IP78347 998 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 SP4Q02446 784 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 FUT2Q10981 343 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 HP1BP3Q5SSJ5 553 aaPredicted RBP15.94■□□□□ 0.14
PTPN9-201ENST00000306726 SPATA20Q8TB22 786 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 CCT8L2Q96SF2 557 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 HAUS2Q9NVX0 235 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 TMOD4Q9NZQ9 345 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 GOLGA8KD6RF30 607 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 GSTO1P78417 241 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 SNX1Q13596 522 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 SYCP3Q8IZU3 236 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 DNAJC7Q99615 494 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 TAOK3Q9H2K8 898 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 PSD3Q9NYI0 1048 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 FBXL5Q9UKA1 691 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 GSTTP1A0A1W2PQM5 241 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 TTI1O43156 1089 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 GNAQP50148 359 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 MFSD14BQ5SR56 506 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 HIBCHQ6NVY1 386 aaPredicted RBP15.94■□□□□ 0.14
PTPN9-201ENST00000306726 WDR93Q6P2C0 686 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 TBC1D1Q86TI0 1168 aaPredicted RBP15.94■□□□□ 0.14
PTPN9-201ENST00000306726 ZNF384Q8TF68 577 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 TLR10Q9BXR5 811 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 POLLQ9UGP5 575 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 C21orf2O43822 256 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 CTNND1O60716 968 aaKnown RBP15.94■□□□□ 0.14
PTPN9-201ENST00000306726 PDHBP11177 359 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 ADCY7P51828 1080 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 DOK7Q18PE1 504 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 MICALCLQ6ZW33 695 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 FAM118BQ9BPY3 351 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 UBXN6Q9BZV1 441 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 EFCC1Q9HA90 598 aa15.94■□□□□ 0.14
PTPN9-201ENST00000306726 MYO3BQ8WXR4 1341 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 B4GALNT4Q76KP1 1039 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 GLG1Q92896 1179 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 CD209Q9NNX6 404 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 DDX25Q9UHL0 483 aaKnown RBP15.93■□□□□ 0.14
PTPN9-201ENST00000306726 SPDYE3A6NKU9 549 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
PTPN9-201ENST00000306726 KRT25Q7Z3Z0 450 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 CCDC170Q8IYT3 715 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 MYH13Q9UKX3 1938 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 FOXO6A8MYZ6 492 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 CETN3O15182 167 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 FGGP02679 453 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 PAPD7Q5XG87 772 aaKnown RBP15.93■□□□□ 0.14
PTPN9-201ENST00000306726 MCTP2Q6DN12 878 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 PCIF1Q9H4Z3 704 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 MAST2Q6P0Q8 1798 aa15.93■□□□□ 0.14
PTPN9-201ENST00000306726 ITIH6Q6UXX5 1313 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 KLRC4O43908 158 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 RCSD1Q6JBY9 416 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 CCDC91Q7Z6B0 441 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 TPH2Q8IWU9 490 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 DCDC2CA8MYV0 355 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 RHOBTB3O94955 611 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 LDHCP07864 332 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 CDK8P49336 464 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 ALKBH5Q6P6C2 394 aaKnown RBP15.92■□□□□ 0.14
PTPN9-201ENST00000306726 NLRP14Q86W24 1093 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 FHDC1Q9C0D6 1143 aaPredicted RBP15.92■□□□□ 0.14
PTPN9-201ENST00000306726 CEP83Q9Y592 693 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 AADACL2Q6P093 401 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 NSMFQ6X4W1 530 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 GDAP1Q8TB36 358 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 ZNF473Q8WTR7 871 aaKnown RBP15.92■□□□□ 0.14
PTPN9-201ENST00000306726 SPIRE2Q8WWL2 714 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 N4BP2L2Q92802 583 aaPredicted RBP15.92■□□□□ 0.14
PTPN9-201ENST00000306726 RPGRIP1Q96KN7 1286 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 COL4A3BPQ9Y5P4 624 aa15.92■□□□□ 0.14
PTPN9-201ENST00000306726 OPLAHO14841 1288 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 FLT3P36888 993 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 CLNS1AP54105 237 aaKnown RBP15.91■□□□□ 0.14
PTPN9-201ENST00000306726 MYCBPQ99417 103 aaPredicted RBP15.91■□□□□ 0.14
PTPN9-201ENST00000306726 ELAC2Q9BQ52 826 aaKnown RBP15.91■□□□□ 0.14
PTPN9-201ENST00000306726 PPIP5K2O43314 1243 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 TBCAO75347 108 aaKnown RBP15.91■□□□□ 0.14
PTPN9-201ENST00000306726 UPP2O95045 317 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 TUBB4BP68371 445 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 KCNH2Q12809 1159 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 ZNF507Q8TCN5 953 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 SCAF8Q9UPN6 1271 aaKnown RBP15.91■□□□□ 0.14
PTPN9-201ENST00000306726 ZNF233A6NK53 670 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 RASSF10A6NK89 507 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 STXBP3O00186 592 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 SART1O43290 800 aaKnown RBP15.91■□□□□ 0.14
PTPN9-201ENST00000306726 TRIM49P0CI25 452 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 TRIM49CP0CI26 452 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 YY1P25490 414 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 PPP2R5BQ15173 497 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 MIIPQ5JXC2 388 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 KLHDC7AQ5VTJ3 777 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 GLYCTKQ8IVS8 523 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 NIM1KQ8IY84 436 aa15.91■□□□□ 0.14
PTPN9-201ENST00000306726 TRAPPC10P48553 1259 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms