RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 NSMCE4AQ9NXX6 385 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 MAST3O60307 1309 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 ST13P50502 369 aaKnown RBP14.33□□□□□ -0.12
TRIM56-201ENST00000306085 TADA2BQ86TJ2 420 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 RASSF3Q86WH2 238 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 ALAS1P13196 640 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 NUP62P37198 522 aaPredicted RBP14.33□□□□□ -0.12
TRIM56-201ENST00000306085 C11orf74Q86VG3 221 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 CDC23Q9UJX2 597 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 H7C1D1 291 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 IL10P22301 178 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 POU5F1BQ06416 359 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 ARL13BQ3SXY8 428 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 RFWD2Q8NHY2 731 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 FAM227BQ96M60 508 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 SIKE1Q9BRV8 207 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 F5H423 210 aaPredicted RBP14.33□□□□□ -0.12
TRIM56-201ENST00000306085 NFKBIAP25963 317 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 PSMD2Q13200 908 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 IYDQ6PHW0 289 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 EXOC8Q8IYI6 725 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 COL4A3BPQ9Y5P4 624 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 UBE4BO95155 1302 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 ITGA6P23229 1130 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 ETF1P62495 437 aaKnown RBP14.33□□□□□ -0.12
TRIM56-201ENST00000306085 NBPF9Q3BBW0 867 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 CNGB3Q9NQW8 809 aa14.33□□□□□ -0.12
TRIM56-201ENST00000306085 WASLO00401 505 aaPredicted RBP14.32□□□□□ -0.12
TRIM56-201ENST00000306085 RNF135Q8IUD6 432 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 ARHGAP18Q8N392 663 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 NFATC2IPQ8NCF5 419 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 SH3KBP1Q96B97 665 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 BBS2Q9BXC9 721 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 MLXIPLQ9NP71 852 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 RHBDL2Q9NX52 303 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 MYO1GB0I1T2 1018 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 NEMP1O14524 444 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 PAPOLAP51003 745 aaKnown RBP14.32□□□□□ -0.12
TRIM56-201ENST00000306085 POLA2Q14181 598 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 TRIM25Q14258 630 aaKnown RBP14.32□□□□□ -0.12
TRIM56-201ENST00000306085 ODR4Q5SWX8 454 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 HORMAD1Q86X24 394 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.32□□□□□ -0.12
TRIM56-201ENST00000306085 TTC8Q8TAM2 541 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 EGFL8Q99944 293 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.32□□□□□ -0.129e-13■■■■□ 20.3
TRIM56-201ENST00000306085 NUP93Q8N1F7 819 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
TRIM56-201ENST00000306085 PTPN23Q9H3S7 1636 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 SPDYE5A6NIY4 337 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 GFPT2O94808 682 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 MYL1P05976 194 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 SNAP25P60880 206 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 SPDYE7PQ495Y7 208 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 ST13P5Q8NFI4 369 aaPredicted RBP14.32□□□□□ -0.12
TRIM56-201ENST00000306085 DTNBP1Q96EV8 351 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 SRPK1Q96SB4 655 aaKnown RBP14.32□□□□□ -0.12
TRIM56-201ENST00000306085 MYO1EQ12965 1108 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 FAM160B1Q5W0V3 765 aa14.32□□□□□ -0.12
TRIM56-201ENST00000306085 IPO5O00410 1097 aaKnown RBP14.31□□□□□ -0.12
TRIM56-201ENST00000306085 EIF3BP55884 814 aaKnown RBP14.31□□□□□ -0.12
TRIM56-201ENST00000306085 KRT37O76014 449 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 KLHL24Q6TFL4 600 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 AGR3Q8TD06 166 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 MYO1DO94832 1006 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 FBLN1P23142 703 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 NDUFAF2Q8N183 169 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 MTERF3Q96E29 417 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 ZNF556Q9HAH1 456 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 LRRC4Q9HBW1 653 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 NFU1Q9UMS0 254 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 SCARA5Q6ZMJ2 495 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 GPKOWQ92917 476 aaPredicted RBP eCLIP14.31□□□□□ -0.12
TRIM56-201ENST00000306085 DEPDC7Q96QD5 511 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 GID8Q9NWU2 228 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 NSD2O96028 1365 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 SMAD1Q15797 465 aaKnown RBP14.31□□□□□ -0.12
TRIM56-201ENST00000306085 SAYSD1Q9NPB0 183 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 POLR2MP0CAP2 368 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 SMARCA1P28370 1054 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 EXOC4Q96A65 974 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 XAGE2Q96GT9 111 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 TGS1Q96RS0 853 aaKnown RBP14.31□□□□□ -0.12
TRIM56-201ENST00000306085 C8orf58Q8NAV2 365 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 CSADQ9Y600 493 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 LSG1Q9H089 658 aaKnown RBP14.31□□□□□ -0.12
TRIM56-201ENST00000306085 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 LARGE2Q8N3Y3 721 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
TRIM56-201ENST00000306085 NR2F2P24468 414 aa14.3□□□□□ -0.12
TRIM56-201ENST00000306085 CYP4A11Q02928 519 aa14.3□□□□□ -0.12
TRIM56-201ENST00000306085 OMA1Q96E52 524 aa14.3□□□□□ -0.12
TRIM56-201ENST00000306085 IFT43Q96FT9 208 aa14.3□□□□□ -0.12
TRIM56-201ENST00000306085 C5orf58C9J3I9 102 aa14.3□□□□□ -0.12
TRIM56-201ENST00000306085 ERFP50548 548 aa14.3□□□□□ -0.12
TRIM56-201ENST00000306085 COPB1P53618 953 aaKnown RBP14.3□□□□□ -0.12
TRIM56-201ENST00000306085 TFDP1Q14186 410 aa14.3□□□□□ -0.12
TRIM56-201ENST00000306085 HEATR4Q86WZ0 1026 aa14.3□□□□□ -0.12
TRIM56-201ENST00000306085 PPP1R14AQ96A00 147 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms