RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 SPDYE3A6NKU9 549 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 SPDYCQ5MJ68 293 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 ZNF571Q7Z3V5 609 aaPredicted RBP20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 KIF2BQ8N4N8 673 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 DDX12PQ92771 950 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 FAM167BQ9BTA0 163 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 TXLNGYQ9BZA5 131 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 COL22A1Q8NFW1 1626 aaPredicted RBP20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 KLHL33A6NCF5 533 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 CYP2D6P10635 497 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 ALKBH5Q6P6C2 394 aaKnown RBP20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 KRT25Q7Z3Z0 450 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 RASGEF1CQ8N431 466 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 ATP8B4Q8TF62 1192 aa20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 PABPC3Q9H361 631 aaKnown RBP20.52■□□□□ 0.88
CHRNB1-201ENST00000306071 PAPPAQ13219 1627 aa20.52■□□□□ 0.87
CHRNB1-201ENST00000306071 FGGP02679 453 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 NUDT17P0C025 328 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 ZBTB48P10074 688 aaPredicted RBP20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 NEK8Q86SG6 692 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 PROSER2Q86WR7 435 aaPredicted RBP20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 NAGPAQ9UK23 515 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 ASAP1Q9ULH1 1129 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 KIF13AQ9H1H9 1805 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 RREB1Q92766 1687 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 KRT16P08779 473 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 ATP2A2P16615 1042 aaKnown RBP20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 IGHMBP2P38935 993 aaKnown RBP20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 GYG1P46976 350 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 CNKSR1Q969H4 720 aa20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 CICQ96RK0 1608 aaPredicted RBP20.51■□□□□ 0.87
CHRNB1-201ENST00000306071 SNX3O60493 162 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 GNAQP50148 359 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 PDE6CP51160 858 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 NAPAP54920 295 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 PLTPP55058 493 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 PSMD2Q13200 908 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 PRPF4BQ13523 1007 aaKnown RBP20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 BLMHQ13867 455 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 ANKRD20A2Q5SQ80 823 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 ANKRD20A1Q5TYW2 823 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 ANKRD20A3Q5VUR7 823 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 ADAT2Q7Z6V5 191 aaKnown RBP20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 PNMA5Q96PV4 448 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 EPB41L4BQ9H329 900 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 SUCLA2Q9P2R7 463 aaPredicted RBP20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 LRP5O75197 1615 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 LUC7L3O95232 432 aaKnown RBP20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 ZNF131P52739 623 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 COPS2P61201 443 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 DR1Q01658 176 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 NKX1-1Q15270 411 aaPredicted RBP20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 UHMK1Q8TAS1 419 aaKnown RBP20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 DYDC1Q8WWB3 177 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 GANQ9H2C0 597 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 TBC1D7Q9P0N9 293 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 MAD2L2Q9UI95 211 aa20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 USP15Q9Y4E8 981 aaPredicted RBP20.5■□□□□ 0.87
CHRNB1-201ENST00000306071 EIF4E1BA6NMX2 242 aaKnown RBP20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 LIN7AO14910 233 aaPredicted RBP20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 EVI5O60447 810 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 ACTN1P12814 892 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 SLCO1A2P46721 670 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 LACTBP83111 547 aaPredicted RBP20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 ATP11AP98196 1134 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 SLC29A2Q14542 456 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 RBBP5Q15291 538 aaKnown RBP20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 IRF2BP2Q7Z5L9 587 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 TRIM59Q8IWR1 403 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 NELFCDQ8IXH7 590 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 RNF25Q96BH1 459 aaPredicted RBP20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 IFT74Q96LB3 600 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 CCDC134Q9H6E4 229 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 NR2E1Q9Y466 385 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 CYTH3O43739 400 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 AGTP01019 485 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 MSH2P43246 934 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 TFAP4Q01664 338 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 CHRNDQ07001 517 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 ZCWPW2Q504Y3 356 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 C6orf118Q5T5N4 469 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 SYCE1Q8N0S2 351 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 RAD54LQ92698 747 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 DCP1AQ9NPI6 582 aaPredicted RBP20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 DAAM1Q9Y4D1 1078 aa20.49■□□□□ 0.87
CHRNB1-201ENST00000306071 ADAMTSL3P82987 1691 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 FLOT1O75955 427 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 COPB2P35606 906 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 POU5F1Q01860 360 aaKnown RBP20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 GRM4Q14833 912 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 SEPT2Q15019 361 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 TAF11Q15544 211 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 SLC35G1Q2M3R5 365 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 THEMIS2Q5TEJ8 643 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 TBCKQ8TEA7 893 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 ERP44Q9BS26 406 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 ETAA1Q9NY74 926 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 AP1G2O75843 785 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 GNA14O95837 355 aa20.48■□□□□ 0.87
CHRNB1-201ENST00000306071 NT5DC3Q86UY8 548 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms