RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CEP63Q96MT8 703 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 IWS1Q96ST2 819 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 SENP7Q9BQF6 1050 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 PAGR1Q9BTK6 254 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 WDR64B1ANS9 1081 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 STAM2O75886 525 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 GUCY2CP25092 1073 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 ZNF131P52739 623 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 TRIM14Q14142 442 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 KNOP1Q1ED39 458 aaKnown RBP24.64■■□□□ 1.54
SMAD1-201ENST00000302085 BMT2Q1RMZ1 405 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 VWA3BQ502W6 1294 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 MAP1SQ66K74 1059 aaPredicted RBP24.64■■□□□ 1.54
SMAD1-201ENST00000302085 PADI6Q6TGC4 694 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 FASTKD5Q7L8L6 764 aaKnown RBP24.64■■□□□ 1.54
SMAD1-201ENST00000302085 NCAPG2Q86XI2 1143 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 MOV10L1Q9BXT6 1211 aaKnown RBP24.64■■□□□ 1.54
SMAD1-201ENST00000302085 R3HDMLQ9H3Y0 253 aa24.64■■□□□ 1.54
SMAD1-201ENST00000302085 PFASO15067 1338 aa24.64■■□□□ 1.53
SMAD1-201ENST00000302085 SRCAPQ6ZRS2 3230 aa24.64■■□□□ 1.53
SMAD1-201ENST00000302085 RASSF10A6NK89 507 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 SPATA31C2B4DYI2 1134 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 ZNF746Q6NUN9 644 aaPredicted RBP24.63■■□□□ 1.53
SMAD1-201ENST00000302085 CNGA4Q8IV77 575 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 CCDC51Q96ER9 411 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 PARVGQ9HBI0 331 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 TXNRD2Q9NNW7 524 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 RBPJLQ9UBG7 517 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 ODF2LQ9ULJ1 636 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 TRAF3IP3Q9Y228 551 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 TPM1P09493 284 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 PSMC5P62195 406 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 MAN2A1Q16706 1144 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 EDRF1Q3B7T1 1238 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 PPP4R3CPQ6ZMV5 832 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 C4orf19Q8IY42 314 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 SLC10A4Q96EP9 437 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 FIZ1Q96SL8 496 aa24.63■■□□□ 1.53
SMAD1-201ENST00000302085 GCNT3O95395 438 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 NMT1P30419 496 aaKnown RBP24.62■■□□□ 1.53
SMAD1-201ENST00000302085 MAPK7Q13164 816 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 SYCP1Q15431 976 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 NYAP1Q6ZVC0 841 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 RDM1Q8NG50 284 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 PPP1R13BQ96KQ4 1090 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 NDST4Q9H3R1 872 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 KIAA1217Q5T5P2 1943 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 RARRES1P49788 294 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 KLK7P49862 253 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 ADAM9Q13443 819 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 STXBP2Q15833 593 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 Q3C1V9 767 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 DAW1Q8N136 415 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 CDHR1Q96JP9 859 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 ERGIC2Q96RQ1 377 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 TELO2Q9Y4R8 837 aa24.62■■□□□ 1.53
SMAD1-201ENST00000302085 NFASCO94856 1347 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 TTC26A0AVF1 554 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 SOWAHBA6NEL2 793 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 PDXKO00764 312 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 HIP1RO75146 1068 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 EIF3JO75822 258 aaKnown RBP24.61■■□□□ 1.53
SMAD1-201ENST00000302085 TNNT1P13805 278 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 ERCC3P19447 782 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 OSBPP22059 807 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 FECHP22830 423 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 YWHABP31946 246 aaKnown RBP24.61■■□□□ 1.53
SMAD1-201ENST00000302085 ALDH5A1P51649 535 aaPredicted RBP24.61■■□□□ 1.53
SMAD1-201ENST00000302085 KCNA1Q09470 495 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 ZNF408Q9H9D4 720 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 SEL1LQ9UBV2 794 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 TCEAL9Q9UHQ7 104 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 PCDHA10Q9Y5I2 948 aa24.61■■□□□ 1.53
SMAD1-201ENST00000302085 LOXHD1Q8IVV2 1947 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 TMEM150BA6NC51 233 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 GNPTABQ3T906 1256 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 FKBP15Q5T1M5 1219 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 ZNF720Q7Z2F6 126 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 NAA15Q9BXJ9 866 aaKnown RBP24.6■■□□□ 1.53
SMAD1-201ENST00000302085 CAPN11Q9UMQ6 739 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 POTEB2H3BUK9 544 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 EIF3DO15371 548 aaKnown RBP eCLIP24.6■■□□□ 1.53
SMAD1-201ENST00000302085 GNA14O95837 355 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 KRT9P35527 623 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 SP2Q02086 613 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 SNAPC2Q13487 334 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 ZC2HC1CQ53FD0 456 aaPredicted RBP24.6■■□□□ 1.53
SMAD1-201ENST00000302085 ABHD10Q9NUJ1 306 aa24.6■■□□□ 1.53
SMAD1-201ENST00000302085 SLC25A27O95847 323 aa24.59■■□□□ 1.53
SMAD1-201ENST00000302085 ICAM3P32942 547 aa24.59■■□□□ 1.53
SMAD1-201ENST00000302085 MARSP56192 900 aaKnown RBP24.59■■□□□ 1.53
SMAD1-201ENST00000302085 MTF1Q14872 753 aa24.59■■□□□ 1.53
SMAD1-201ENST00000302085 PTPN14Q15678 1187 aa24.59■■□□□ 1.53
SMAD1-201ENST00000302085 CCDC40Q4G0X9 1142 aa24.59■■□□□ 1.53
SMAD1-201ENST00000302085 SH2D3AQ9BRG2 576 aa24.59■■□□□ 1.53
SMAD1-201ENST00000302085 TYW1Q9NV66 732 aaKnown RBP24.59■■□□□ 1.53
SMAD1-201ENST00000302085 SOWAHDA6NJG2 315 aa24.58■■□□□ 1.53
SMAD1-201ENST00000302085 CETN3O15182 167 aa24.58■■□□□ 1.53
SMAD1-201ENST00000302085 CALUO43852 315 aaPredicted RBP24.58■■□□□ 1.53
SMAD1-201ENST00000302085 ODR4Q5SWX8 454 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms