RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CFAP73A6NFT4 308 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 SMIM23A6NLE4 172 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 TRAF5O00463 557 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 RARAP10276 462 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 TXKP42681 527 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 GRM4Q14833 912 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 TRIM59Q8IWR1 403 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 RASGEF1CQ8N431 466 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 DDX12PQ92771 950 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 TSG101Q99816 390 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 NUDT12Q9BQG2 462 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 ACTN1P12814 892 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 NQO1P15559 274 aaKnown RBP11.85□□□□□ -0.51
ZNF558-201ENST00000301475 IFI35P80217 286 aaPredicted RBP11.85□□□□□ -0.51
ZNF558-201ENST00000301475 ZNF34Q8IZ26 560 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 CCHCR1Q8TD31 782 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 PRMT1Q99873 361 aaKnown RBP11.85□□□□□ -0.51
ZNF558-201ENST00000301475 SLC5A4Q9NY91 659 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 CD2APQ9Y5K6 639 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 POTEMA6NI47 508 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 COPB2P35606 906 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 IFNAR2P48551 515 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 EIF3BP55884 814 aaKnown RBP11.85□□□□□ -0.51
ZNF558-201ENST00000301475 FKBP3Q00688 224 aaKnown RBP11.85□□□□□ -0.51
ZNF558-201ENST00000301475 NONOQ15233 471 aaKnown RBP eCLIP11.85□□□□□ -0.51
ZNF558-201ENST00000301475 SUSD4Q5VX71 490 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 GALNT17Q6IS24 598 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 IRF2BP2Q7Z5L9 587 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 NEK8Q86SG6 692 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 HOOK3Q86VS8 718 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 DZIP3Q86Y13 1208 aaKnown RBP11.85□□□□□ -0.51
ZNF558-201ENST00000301475 PROM2Q8N271 834 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 RNF25Q96BH1 459 aaPredicted RBP11.85□□□□□ -0.51
ZNF558-201ENST00000301475 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 RIC8AQ9NPQ8 531 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 FAM114A2Q9NRY5 505 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 NAGPAQ9UK23 515 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 STXBP5LQ9Y2K9 1186 aa11.85□□□□□ -0.51
ZNF558-201ENST00000301475 IGF2BP3O00425 579 aaKnown RBP eCLIP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 NUDT17P0C025 328 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 MIS18BP1Q6P0N0 1132 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 PEX26Q7Z412 305 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 ERICH1Q86X53 443 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 MYOCDQ8IZQ8 938 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 KIF2BQ8N4N8 673 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 CCDC26Q8TAB7 109 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 AZI2Q9H6S1 392 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 ZDHHC18Q9NUE0 388 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 SAMD15Q9P1V8 674 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 STK17AQ9UEE5 414 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 UTP11Q9Y3A2 253 aaKnown RBP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 TLDC2A0PJX2 215 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 GOLGA8HP0CJ92 632 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 CYP19A1P11511 503 aaPredicted RBP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 DDB1Q16531 1140 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 CAPRIN2Q6IMN6 1127 aaKnown RBP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 SLFN11Q7Z7L1 901 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 RNF217Q8TC41 542 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 MICAL1Q8TDZ2 1067 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 TBCKQ8TEA7 893 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 PARD3BQ8TEW8 1205 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 RAD54LQ92698 747 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 ZMYND12Q9H0C1 365 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 INTS9Q9NV88 658 aaKnown RBP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 SCN7AQ01118 1682 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 VIMP08670 466 aaKnown RBP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 KRT16P08779 473 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 IGHMBP2P38935 993 aaKnown RBP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 ABL2P42684 1182 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 NAPAP54920 295 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 TFAP4Q01664 338 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 COASYQ13057 564 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 FAM182BQ5T319 152 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 DPY19L2P1Q6NXN4 242 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 ALKBH5Q6P6C2 394 aaKnown RBP11.84□□□□□ -0.51
ZNF558-201ENST00000301475 KRT25Q7Z3Z0 450 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 DAAM2Q86T65 1068 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 NELFCDQ8IXH7 590 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 PGM2Q96G03 612 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 ECT2Q9H8V3 914 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 TBC1D7Q9P0N9 293 aa11.84□□□□□ -0.51
ZNF558-201ENST00000301475 USP17L3A6NCW0 530 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 USP17L4A6NCW7 530 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 SPDYE3A6NKU9 549 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 ENO4A6NNW6 628 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 OAS1P00973 400 aaKnown RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 FGGP02679 453 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 CALRP27797 417 aaKnown RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 SARNPP82979 210 aaKnown RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 USP17L1Q7RTZ2 530 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 NT5DC3Q86UY8 548 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 NEK9Q8TD19 979 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 CNKSR1Q969H4 720 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 DNAJC19Q96DA6 116 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 CCDC134Q9H6E4 229 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 GOPCQ9HD26 462 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms