RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 EXOC1LA0A1B0GW35 172 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 N4BP2L2Q92802 583 aaPredicted RBP16.66■□□□□ 0.26
FNDC1-201ENST00000297267 RNF25Q96BH1 459 aaPredicted RBP16.66■□□□□ 0.26
FNDC1-201ENST00000297267 FAF2Q96CS3 445 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 FAM167BQ9BTA0 163 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 IRX2Q9BZI1 471 aaPredicted RBP16.66■□□□□ 0.26
FNDC1-201ENST00000297267 MIS12Q9H081 205 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 ABCC12Q96J65 1359 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 C1orf228Q6PIY5 440 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 SPIRE2Q8WWL2 714 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 DPF2Q92785 391 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 ZMYND12Q9H0C1 365 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 TYW1Q9NV66 732 aaKnown RBP16.66■□□□□ 0.26
FNDC1-201ENST00000297267 DCTN4Q9UJW0 460 aa16.66■□□□□ 0.26
FNDC1-201ENST00000297267 SERPING1P05155 500 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 ASPHQ12797 758 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 KRT27Q7Z3Y8 459 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 FAM213AQ9BRX8 229 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 NDST4Q9H3R1 872 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 POLR1AO95602 1720 aaPredicted RBP16.65■□□□□ 0.26
FNDC1-201ENST00000297267 FAM160B1Q5W0V3 765 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 SFR1Q86XK3 245 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
FNDC1-201ENST00000297267 SCARF1Q14162 830 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 PDCD7Q8N8D1 485 aaKnown RBP16.65■□□□□ 0.26
FNDC1-201ENST00000297267 MSTO1Q9BUK6 570 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 NRBP2Q9NSY0 501 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 YWHAEP62258 255 aaKnown RBP16.65■□□□□ 0.26
FNDC1-201ENST00000297267 COPRSQ9NQ92 184 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 MCF2LO15068 1137 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 EEF1B2P24534 225 aaKnown RBP16.65■□□□□ 0.26
FNDC1-201ENST00000297267 PSMA2P25787 234 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 PSMC5P62195 406 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 IL31Q6EBC2 164 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 ARL8AQ96BM9 186 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 SLC13A1Q9BZW2 595 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 CCDC68Q9H2F9 335 aa16.65■□□□□ 0.26
FNDC1-201ENST00000297267 PHLPP2Q6ZVD8 1323 aa16.64■□□□□ 0.26
FNDC1-201ENST00000297267 PGRMC1O00264 195 aaKnown RBP16.64■□□□□ 0.25
FNDC1-201ENST00000297267 GSTA4O15217 222 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 NME3Q13232 169 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 PPP2R5BQ15173 497 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 SARS2Q9NP81 518 aaKnown RBP16.64■□□□□ 0.25
FNDC1-201ENST00000297267 PCDHA6Q9UN73 950 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 AXIN2Q9Y2T1 843 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 PCDHA8Q9Y5H6 950 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
FNDC1-201ENST00000297267 GOLGA8RI6L899 631 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 TAF11Q15544 211 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 TRIML1Q8N9V2 468 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 BCORL1Q5H9F3 1711 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 EPHB4P54760 987 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 OR6B3Q8NGW1 331 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 RABGGTAQ92696 567 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 LARSQ9P2J5 1176 aaKnown RBP16.64■□□□□ 0.25
FNDC1-201ENST00000297267 PPP1R9AQ9ULJ8 1098 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 NR1D1P20393 614 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 SUN1O94901 812 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 KRT3P12035 628 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 GARSP41250 739 aaKnown RBP16.64■□□□□ 0.25
FNDC1-201ENST00000297267 RNF26Q9BY78 433 aaPredicted RBP16.64■□□□□ 0.25
FNDC1-201ENST00000297267 KRT82Q9NSB4 513 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 ABHD10Q9NUJ1 306 aa16.64■□□□□ 0.25
FNDC1-201ENST00000297267 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 APOEP02649 317 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 FGFR4P22455 802 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 ANKMY2Q8IV38 441 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 FGD4Q96M96 766 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 MT-ND3P03897 115 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 SOX5P35711 763 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 YWHAHQ04917 246 aaPredicted RBP16.63■□□□□ 0.25
FNDC1-201ENST00000297267 KIF19Q2TAC6 998 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 PDXDC2PQ6P474 469 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 C1orf54Q8WWF1 131 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 MFAP3LO75121 409 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 ATP1A1P05023 1023 aaKnown RBP16.63■□□□□ 0.25
FNDC1-201ENST00000297267 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 PARVGQ9HBI0 331 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 ANAPC7Q9UJX3 599 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 DNAJC12Q9UKB3 198 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 CIAO1O76071 339 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 SLFN14P0C7P3 912 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 NUGGCQ68CJ6 796 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 GSDMAQ96QA5 445 aa16.63■□□□□ 0.25
FNDC1-201ENST00000297267 N4BP1O75113 896 aaKnown RBP16.63■□□□□ 0.25
FNDC1-201ENST00000297267 PNMA6AP0CW24 399 aaPredicted RBP16.63■□□□□ 0.25
FNDC1-201ENST00000297267 FAF1Q9UNN5 650 aaPredicted RBP16.63■□□□□ 0.25
FNDC1-201ENST00000297267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.62■□□□□ 0.25
FNDC1-201ENST00000297267 DHTKD1Q96HY7 919 aaPredicted RBP16.62■□□□□ 0.25
FNDC1-201ENST00000297267 SAMD9LQ8IVG5 1584 aa16.62■□□□□ 0.25
FNDC1-201ENST00000297267 ARHGAP4P98171 946 aa16.62■□□□□ 0.25
FNDC1-201ENST00000297267 KCTD19Q17RG1 926 aaPredicted RBP16.62■□□□□ 0.25
FNDC1-201ENST00000297267 LPXNO60711 386 aa16.62■□□□□ 0.25
FNDC1-201ENST00000297267 GPC4O75487 556 aa16.62■□□□□ 0.25
FNDC1-201ENST00000297267 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.62■□□□□ 0.25
FNDC1-201ENST00000297267 TSPYL2Q9H2G4 693 aaPredicted RBP16.62■□□□□ 0.25
FNDC1-201ENST00000297267 MOSPD1Q9UJG1 213 aa16.62■□□□□ 0.25
FNDC1-201ENST00000297267 THOC5Q13769 683 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms