RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 A0A1B0GTH6 734 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 BRAFP15056 766 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ARL4CP56559 192 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 LRIG3Q6UXM1 1119 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 PCGF5Q86SE9 256 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ADPGKQ9BRR6 497 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ZNF577Q9BSK1 485 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 FAM167BQ9BTA0 163 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 OSBPL1AQ9BXW6 950 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 EIF2AQ9BY44 585 aaKnown RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 SMYD2Q9NRG4 433 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 COPEO14579 308 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 TMPRSS15P98073 1019 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 KRT39Q6A163 491 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ZNF473Q8WTR7 871 aaKnown RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 TGS1Q96RS0 853 aaKnown RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 DDX47Q9H0S4 455 aaKnown RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 PIH1D3Q9NQM4 214 aaKnown RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 GINM1Q9NU53 330 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 NCK2O43639 380 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 TJP3O95049 919 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ORC2Q13416 577 aaPredicted RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 NRBP2Q9NSY0 501 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 DNAJC17Q9NVM6 304 aaKnown RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ANKFY1Q9P2R3 1169 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 LIMA1Q9UHB6 759 aaKnown RBP11.85□□□□□ -0.51
PBRM1-201ENST00000296302 FBXL5Q9UKA1 691 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 DNAJC12Q9UKB3 198 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 ITIH6Q6UXX5 1313 aa11.85□□□□□ -0.51
PBRM1-201ENST00000296302 PLEKHA8P1O95397 391 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 CASP1P29466 404 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 EEF1DP29692 281 aaKnown RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 ELF1P32519 619 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 RAD23BP54727 409 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 AP2B1P63010 937 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 GPC5P78333 572 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 BYSLQ13895 437 aaKnown RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 MTF1Q14872 753 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 KLHL38Q2WGJ6 581 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 CCNI2Q6ZMN8 369 aaPredicted RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 NYAP1Q6ZVC0 841 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 HACE1Q8IYU2 909 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 HNRNPLLQ8WVV9 542 aaKnown RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 DPF2Q92785 391 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 STAMBPL1Q96FJ0 436 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 CCT8L2Q96SF2 557 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 MED7O43513 233 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 CA8P35219 290 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 DYNLT1P63172 113 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 CEP70Q8NHQ1 597 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 DYDC2Q96IM9 177 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 PCIF1Q9H4Z3 704 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 KMT5AQ9NQR1 393 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 ANLNQ9NQW6 1124 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 LCMT1Q9UIC8 334 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 LOC102724159A0A0B4J2E5 919 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 HNRNPCL1O60812 293 aaKnown RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 DHX34Q14147 1143 aaKnown RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 PWP2Q15269 919 aaKnown RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 DLGAP5Q15398 846 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 FSCBQ5H9T9 825 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 TTC17Q96AE7 1141 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 RBM41Q96IZ5 413 aaKnown RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 NUDCD1Q96RS6 583 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 BRIP1Q9BX63 1249 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 APOBEC2Q9Y235 224 aaKnown RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 YEATS2Q9ULM3 1422 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 ARHGAP10A1A4S6 786 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 GOLGA8CPA6NN73 597 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 GOLGA8SH3BPF8 625 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 EEF1B2P24534 225 aaKnown RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 PFKFB3Q16875 520 aaPredicted RBP11.84□□□□□ -0.51
PBRM1-201ENST00000296302 C1orf146Q5VVC0 180 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 KCTD6Q8NC69 237 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 MED14O60244 1454 aa11.84□□□□□ -0.51
PBRM1-201ENST00000296302 MEIS1O00470 390 aa11.83□□□□□ -0.51
PBRM1-201ENST00000296302 GNGT2O14610 69 aa11.83□□□□□ -0.51
PBRM1-201ENST00000296302 CFLARO15519 480 aa11.83□□□□□ -0.51
PBRM1-201ENST00000296302 GGPS1O95749 300 aa11.83□□□□□ -0.51
PBRM1-201ENST00000296302 CORO7P57737 925 aa11.83□□□□□ -0.51
PBRM1-201ENST00000296302 TBC1D10CQ8IV04 446 aa11.83□□□□□ -0.51
PBRM1-201ENST00000296302 CCDC124Q96CT7 223 aaKnown RBP11.83□□□□□ -0.51
PBRM1-201ENST00000296302 ZMAT2Q96NC0 199 aaKnown RBP11.83□□□□□ -0.51
PBRM1-201ENST00000296302 LRRC1Q9BTT6 524 aa11.83□□□□□ -0.51
PBRM1-201ENST00000296302 CALN1Q9BXU9 219 aa11.83□□□□□ -0.51
PBRM1-201ENST00000296302 HPCAL4Q9UM19 191 aa11.83□□□□□ -0.51
PBRM1-201ENST00000296302 H7C1W4 665 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 KRT38O76015 456 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 FBXW10Q5XX13 1052 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 COA7Q96BR5 231 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 THOC1Q96FV9 657 aaKnown RBP11.83□□□□□ -0.52
PBRM1-201ENST00000296302 FGD4Q96M96 766 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 MED10Q9BTT4 135 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 NDE1Q9NXR1 346 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 LEMD3Q9Y2U8 911 aa11.83□□□□□ -0.52
PBRM1-201ENST00000296302 NOC2LQ9Y3T9 749 aaKnown RBP11.83□□□□□ -0.52
PBRM1-201ENST00000296302 ZRANB2O95218 330 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms