RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 PADI3Q9ULW8 664 aa18.27■□□□□ 0.52
TMEM41A-201ENST00000296254 PLAGL2Q9UPG8 496 aa18.27■□□□□ 0.52
TMEM41A-201ENST00000296254 PCDHA2Q9Y5H9 948 aa18.27■□□□□ 0.52
TMEM41A-201ENST00000296254 KIAA1671Q9BY89 1806 aa18.27■□□□□ 0.52
TMEM41A-201ENST00000296254 KDM3AQ9Y4C1 1321 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 MBTPS2O43462 519 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 GTF2F1P35269 517 aaKnown RBP eCLIP18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 IRS1P35568 1242 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 TMEM62Q0P6H9 643 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 PAK2Q13177 524 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 ITGB3BPQ13352 177 aaPredicted RBP18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 SMAD4Q13485 552 aaKnown RBP18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 PLCB4Q15147 1175 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 NECTIN1Q15223 517 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 PLPPR4Q7Z2D5 763 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 RTN4RL1Q86UN2 441 aaPredicted RBP18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 TRAPPC12Q8WVT3 735 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 UIMC1Q96RL1 719 aa18.26■□□□□ 0.51
TMEM41A-201ENST00000296254 SMIM35A0A1B0GVV1 85 aa18.25■□□□□ 0.51
TMEM41A-201ENST00000296254 CEP55Q53EZ4 464 aa18.25■□□□□ 0.51
TMEM41A-201ENST00000296254 NAALADL2Q58DX5 795 aa18.25■□□□□ 0.51
TMEM41A-201ENST00000296254 APOA5Q6Q788 366 aa18.25■□□□□ 0.51
TMEM41A-201ENST00000296254 PGBD1Q96JS3 809 aa18.25■□□□□ 0.51
TMEM41A-201ENST00000296254 ANO3Q9BYT9 981 aa18.25■□□□□ 0.51
TMEM41A-201ENST00000296254 UPF3BQ9BZI7 483 aaKnown RBP18.25■□□□□ 0.51
TMEM41A-201ENST00000296254 AGO4Q9HCK5 861 aaKnown RBP18.25■□□□□ 0.51
TMEM41A-201ENST00000296254 RIC8AQ9NPQ8 531 aa18.25■□□□□ 0.51
TMEM41A-201ENST00000296254 LINC01565O15544 149 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 ITGB1P05556 798 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 STAG3L1P0CL83 205 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 ARP10275 920 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 SCG2P13521 617 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 DNAJB1P25685 340 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 SLC26A2P50443 739 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 STAT5BP51692 787 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 NAPAP54920 295 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 FUT2Q10981 343 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 PAN2Q504Q3 1202 aaKnown RBP18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 PPP2R3CQ969Q6 453 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 CELF4Q9BZC1 486 aaKnown RBP18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 TMX1Q9H3N1 280 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 IGFLR1Q9H665 355 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 ANO2Q9NQ90 1003 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 RBM28Q9NW13 759 aaKnown RBP18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 CD207Q9UJ71 328 aa18.24■□□□□ 0.51
TMEM41A-201ENST00000296254 ATG7O95352 703 aa18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 FOSP01100 380 aaPredicted RBP18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 SREBF1P36956 1147 aa18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 NDUFV1P49821 464 aa18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 ADCY7P51828 1080 aa18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 KRT76Q01546 638 aa18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 MTHFD1LQ6UB35 978 aa18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 KLHL23Q8NBE8 558 aa18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 SPPL3Q8TCT6 385 aa18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 MSLNLQ96KJ4 702 aa18.23■□□□□ 0.51
TMEM41A-201ENST00000296254 IGKV6D-21A0A0A0MT36 114 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 hCG_1984214I3L0E3 225 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 STXBP3O00186 592 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 MEIS1O00470 390 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 CCNE2O96020 404 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 GATMP50440 423 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 IRX6P78412 446 aaPredicted RBP18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 AP3B2Q13367 1082 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 ADAM15Q13444 863 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 RTN1Q16799 776 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 TMEM266Q2M3C6 531 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 HERC4Q5GLZ8 1057 aaPredicted RBP18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 SYNE3Q6ZMZ3 975 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 ADGRD2Q7Z7M1 963 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 NME8Q8N427 588 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 ZNF713Q8N859 430 aaPredicted RBP18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 POF1BQ8WVV4 589 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 MUTYHQ9UIF7 546 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 ZNF318Q5VUA4 2279 aa18.22■□□□□ 0.51
TMEM41A-201ENST00000296254 LOXHD1Q8IVV2 1947 aa18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 EYA4O95677 639 aa18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 SARSP49591 514 aaKnown RBP18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 CLK2P49760 499 aaKnown RBP18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 FAM43BQ6ZT52 329 aaPredicted RBP18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 EFHBQ8N7U6 833 aa18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 SMRP1Q8NCR6 262 aa18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 ATP8B4Q8TF62 1192 aa18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 ERVK-5Q9HDB9 667 aa18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 BARHL2Q9NY43 387 aa18.21■□□□□ 0.51
TMEM41A-201ENST00000296254 COL1A2P08123 1366 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 ZBTB43O43298 467 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 HBP1O60381 514 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 ABHD15Q6UXT9 468 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 HFE2Q6ZVN8 426 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 NIPA1Q7RTP0 329 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 CCDC60Q8IWA6 550 aaPredicted RBP18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 TMEM40Q8WWA1 233 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 GLT8D2Q9H1C3 349 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 KCNH6Q9H252 994 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 TMEM260Q9NX78 707 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 CLEC1BQ9P126 229 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 BRPF3Q9ULD4 1205 aa18.2■□□□□ 0.5
TMEM41A-201ENST00000296254 LRFN2Q9ULH4 789 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms