RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 MECOMQ03112 1051 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 COASYQ13057 564 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 SLC35G1Q2M3R5 365 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 CAPRIN2Q6IMN6 1127 aaKnown RBP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 ZNF444Q8N0Y2 327 aaPredicted RBP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 GLG1Q92896 1179 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 KLHL29Q96CT2 875 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 FGFBP2Q9BYJ0 223 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 ECT2Q9H8V3 914 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 DUOX1Q9NRD9 1551 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 TFCP2L1Q9NZI6 479 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 MAD2L2Q9UI95 211 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 AGAP1Q9UPQ3 857 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 M0R2N6 131 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 IGF2BP3O00425 579 aaKnown RBP eCLIP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 UPP2O95045 317 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 TDP2O95551 362 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 SLC8A3P57103 927 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 GRM4Q14833 912 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 HERC4Q5GLZ8 1057 aaPredicted RBP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 TRIM68Q6AZZ1 485 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 BZW1Q7L1Q6 419 aaKnown RBP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 OTUD6AQ7L8S5 288 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 SPICE1Q8N0Z3 855 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 TPCN2Q8NHX9 752 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 NEK9Q8TD19 979 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 PLCD4Q9BRC7 762 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 UBA5Q9GZZ9 404 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 IL17RBQ9NRM6 502 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 NR2E1Q9Y466 385 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 H2AFZP0C0S5 128 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 TNNI2P48788 182 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 ALDH5A1P51649 535 aaPredicted RBP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 PMS2P54278 862 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 KCNH2Q12809 1159 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 ADAM9Q13443 819 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 H2AFVQ71UI9 128 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 RAD54LQ92698 747 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 SYN2Q92777 582 aaPredicted RBP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 CALR3Q96L12 384 aaKnown RBP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 SPATS2LQ9NUQ6 558 aaKnown RBP11.17□□□□□ -0.62
LMX1A-201ENST00000294816 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 DAAM1Q9Y4D1 1078 aa11.17□□□□□ -0.62
LMX1A-201ENST00000294816 MYH7BA7E2Y1 1941 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 NPHP3-ACAD11A0A0J9YXS1 232 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 EME2A4GXA9 379 aaPredicted RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 GNA11P29992 359 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 PRDX5P30044 214 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 EIF3BP55884 814 aaKnown RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 DR1Q01658 176 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 GALNT17Q6IS24 598 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 REXO1Q8N1G1 1221 aaKnown RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 ANKRD42Q8N9B4 389 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 RAB34Q9BZG1 259 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 RAB17Q9H0T7 212 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 SLITRK6Q9H5Y7 841 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 NAGPAQ9UK23 515 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 AMFRQ9UKV5 643 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 ABCB11O95342 1321 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 CCDC169A6NNP5 214 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 FLOT1O75955 427 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 CYP19A1P11511 503 aaPredicted RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 NQO1P15559 274 aaKnown RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 VPS36Q86VN1 386 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 ZBTB10Q96DT7 871 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 ARPP21Q9UBL0 812 aaPredicted RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 SAP30BPQ9UHR5 308 aaKnown RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 DBR1Q9UK59 544 aaKnown RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 NIP7Q9Y221 180 aaKnown RBP eCLIP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 SLC37A4O43826 429 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 SLC29A2Q14542 456 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 EPS8L3Q8TE67 593 aaKnown RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 ZNF317Q96PQ6 595 aaPredicted RBP11.16□□□□□ -0.62
LMX1A-201ENST00000294816 KCNK9Q9NPC2 374 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 KCNG1Q9UIX4 513 aa11.16□□□□□ -0.62
LMX1A-201ENST00000294816 ZNF142P52746 1687 aaPredicted RBP11.15□□□□□ -0.62
LMX1A-201ENST00000294816 GOLGA6L10A0A0M3HER8 536 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 CFAP73A6NFT4 308 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 TMEM110-MUSTN1A8MSY1 372 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 EVI5O60447 810 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 FGRP09769 529 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 MYBL1P10243 752 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 FGFR4P22455 802 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 DZIP1Q86YF9 867 aaKnown RBP11.15□□□□□ -0.62
LMX1A-201ENST00000294816 PROM2Q8N271 834 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 EIF1ADQ8N9N8 165 aaKnown RBP11.15□□□□□ -0.62
LMX1A-201ENST00000294816 TLCD1Q96CP7 247 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 PIGSQ96S52 555 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 FGFR1OP2Q9NVK5 253 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 CETN3O15182 167 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 MKRN4PQ13434 485 aaPredicted RBP11.15□□□□□ -0.62
LMX1A-201ENST00000294816 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
LMX1A-201ENST00000294816 GJB7Q6PEY0 223 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 ERICH1Q86X53 443 aa11.15□□□□□ -0.62
LMX1A-201ENST00000294816 ZNF34Q8IZ26 560 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms